RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SLC10A2Q12908 348 aaPredicted RBP10.99□□□□□ -0.65
TPM1-210ENST00000558264 TFDP2Q14188 446 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 DCAF6Q58WW2 860 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 NUGGCQ68CJ6 796 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 C6orf89Q6UWU4 347 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 HFE2Q6ZVN8 426 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 MICALCLQ6ZW33 695 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 TADA2BQ86TJ2 420 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 MAP7D3Q8IWC1 876 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 DEFB106AQ8N104 65 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 C3orf58Q8NDZ4 430 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 FBF1Q8TES7 1133 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 TRIB2Q92519 343 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 LGALS13Q9UHV8 139 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 CAPN7Q9Y6W3 813 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 RALGAPA2Q2PPJ7 1873 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 GOLGA6L7A0A1B0GV03 622 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 C5orf60A6NFR6 353 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 DPYSL4O14531 572 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 TCEA3O75764 348 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 GOT1P17174 413 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 STX2P32856 288 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 ELK3P41970 407 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 MAGEA9P43362 315 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 SULT1E1P49888 294 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 CLCNKBP51801 687 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 MRPS6P82932 125 aaKnown RBP10.99□□□□□ -0.65
TPM1-210ENST00000558264 NME3Q13232 169 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 SMAD1Q15797 465 aaKnown RBP10.99□□□□□ -0.65
TPM1-210ENST00000558264 BOLA3Q53S33 107 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 FAM47EQ6ZV65 393 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 PALM2Q8IXS6 379 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 CRYBG2Q8N1P7 616 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 AGGF1Q8N302 714 aaeCLIP10.99□□□□□ -0.65
TPM1-210ENST00000558264 TTC25Q96NG3 672 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 KCTD15Q96SI1 283 aaPredicted RBP10.99□□□□□ -0.65
TPM1-210ENST00000558264 CEP41Q9BYV8 373 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 USP29Q9HBJ7 922 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 GDAP2Q9NXN4 497 aa10.99□□□□□ -0.65
TPM1-210ENST00000558264 DCAF8L1A6NGE4 600 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 SRRM3A6NNA2 597 aaPredicted RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 M0QZ92 97 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 CHRNA1P02708 482 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 APRTP07741 180 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 ABHD2P08910 425 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 SETSIPP0DME0 302 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 AMPD1P23109 780 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 L1CAMP32004 1257 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 SCNN1GP51170 649 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 CACNA2D1P54289 1103 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 SYPL2Q5VXT5 272 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 FBXW10Q5XX13 1052 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 CCDC121Q6ZUS5 278 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 PAQR9Q6ZVX9 377 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 SLC26A9Q7LBE3 791 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 PCGF5Q86SE9 256 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 TRABD2AQ86V40 505 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 PDIK1LQ8N165 341 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 GSTCDQ8NEC7 633 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 CFAP36Q96G28 342 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 KCNK16Q96T55 309 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 FOXP3Q9BZS1 431 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 TRABDQ9H4I3 376 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 NRDE2Q9H7Z3 1164 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 AGO3Q9H9G7 860 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 ZFYVE28Q9HCC9 887 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 KRT82Q9NSB4 513 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 PIH1D1Q9NWS0 290 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 RABGEF1Q9UJ41 708 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 KBTBD13C9JR72 458 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 XPOTO43592 962 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 GNAT1P11488 350 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 PTPN1P18031 435 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 YWHAGP61981 247 aaKnown RBP eCLIP10.98□□□□□ -0.65
TPM1-210ENST00000558264 CAP1Q01518 475 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 RNASELQ05823 741 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 PDK2Q15119 407 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 XKR4Q5GH76 650 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 CCDC197Q8NCU1 140 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 PPP1R10Q96QC0 940 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 TGS1Q96RS0 853 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 FAM105AQ9NUU6 356 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 TMEM30AQ9NV96 361 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 MTMR10Q9NXD2 777 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 DDX43Q9NXZ2 648 aaKnown RBP10.98□□□□□ -0.65
TPM1-210ENST00000558264 NKIRAS1Q9NYS0 192 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 SAMD15Q9P1V8 674 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 ZNF236Q9UL36 1845 aa10.98□□□□□ -0.65
TPM1-210ENST00000558264 MYBPHLA2RUH7 354 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 POMCP01189 267 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 GHRP10912 638 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 FOXN2P32314 431 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 RPA3P35244 121 aaPredicted RBP10.97□□□□□ -0.65
TPM1-210ENST00000558264 PNPLA4P41247 253 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 WDR4P57081 412 aaKnown RBP10.97□□□□□ -0.65
TPM1-210ENST00000558264 GPRIN1Q7Z2K8 1008 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 ATP11CQ8NB49 1132 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms