RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 NDUFV2P19404 249 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 SDHBP21912 280 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 TBXAS1P24557 533 aaPredicted RBP10.67□□□□□ -0.7
USP3-207ENST00000558218 ATP5C1P36542 298 aaKnown RBP10.67□□□□□ -0.7
USP3-207ENST00000558218 KIF11P52732 1056 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 SLC8A3P57103 927 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 GOLGA8FQ08AF8 430 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 GOLGA8DPQ0D2H9 430 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 DHCR24Q15392 516 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 HSF5Q4G112 596 aaPredicted RBP10.67□□□□□ -0.7
USP3-207ENST00000558218 ARHGAP17Q68EM7 881 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 LAIR1Q6GTX8 287 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 Q6ZS52 159 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 HTR3DQ70Z44 454 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 SYT13Q7L8C5 426 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 WDR5BQ86VZ2 330 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 TRIML1Q8N9V2 468 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 SLC35C1Q96A29 364 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 ACDQ96AP0 544 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 HEXIM2Q96MH2 286 aaKnown RBP10.67□□□□□ -0.7
USP3-207ENST00000558218 TWNKQ96RR1 684 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 CDK5RAP1Q96SZ6 601 aaKnown RBP10.67□□□□□ -0.7
USP3-207ENST00000558218 MMRN2Q9H8L6 949 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 FBRSL1Q9HCM7 1045 aaKnown RBP10.67□□□□□ -0.7
USP3-207ENST00000558218 CISHQ9NSE2 258 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 FAM49BQ9NUQ9 324 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 CLIC5Q9NZA1 410 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 CFAP97Q9P2B7 532 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 HMGXB4Q9UGU5 601 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 MAN1B1Q9UKM7 699 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 SLC8A2Q9UPR5 921 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 SH3BP1Q9Y3L3 701 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 USP3Q9Y6I4 520 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 GVINP1Q7Z2Y8 2422 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 TLR5O60602 858 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 FGFR1OPO95684 399 aaKnown RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 EGFP01133 1207 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 RETP07949 1114 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 CD58P19256 250 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 ADORA2BP29275 332 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 PLA2G4AP47712 749 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 PMS1P54277 932 aaKnown RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 RAD23BP54727 409 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 MRPS21P82921 87 aaKnown RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 GAD2Q05329 585 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 IFRD2Q12894 506 aaPredicted RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 MORC3Q14149 939 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 SIM2Q14190 667 aaPredicted RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 PPP1R26Q5T8A7 1209 aaPredicted RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 RHBDF2Q6PJF5 856 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 CCDC186Q7Z3E2 898 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 ARHGAP18Q8N392 663 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 ANKRD52Q8NB46 1076 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 ELMO3Q96BJ8 720 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 EEF2KMTQ96G04 330 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 LOXL4Q96JB6 756 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 NACA2Q9H009 215 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 GMIPQ9P107 970 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 NCDNQ9UBB6 729 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 EBF1Q9UH73 591 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 GMEB2Q9UKD1 530 aa10.66□□□□□ -0.7
USP3-207ENST00000558218 SMG5Q9UPR3 1016 aaKnown RBP10.66□□□□□ -0.7
USP3-207ENST00000558218 PRR5-ARHGAP8B1AHC4 643 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 CYP17A1P05093 508 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 RALAP11233 206 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
USP3-207ENST00000558218 ACO1P21399 889 aaKnown RBP10.65□□□□□ -0.7
USP3-207ENST00000558218 OPRD1P41143 372 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 TNFRSF4P43489 277 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 FMO5P49326 533 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 FNTBP49356 437 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 MARSP56192 900 aaKnown RBP10.65□□□□□ -0.7
USP3-207ENST00000558218 UBE2HP62256 183 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 ARHGAP8P85298 464 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 ORC1Q13415 861 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 CUL2Q13617 745 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 GAB4Q2WGN9 574 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 CBWD6Q4V339 395 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 DCAF17Q5H9S7 520 aaPredicted RBP10.65□□□□□ -0.7
USP3-207ENST00000558218 CBWD3Q5JTY5 395 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 CBWD5Q5RIA9 395 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 TTI2Q6NXR4 508 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 LIAT1Q6ZQX7 453 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 ERMP1Q7Z2K6 904 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 SLC4A11Q8NBS3 891 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 TTC16Q8NEE8 873 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 JAKMIP2Q96AA8 810 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 PNKPQ96T60 521 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 KLF16Q9BXK1 252 aaPredicted RBP10.65□□□□□ -0.7
USP3-207ENST00000558218 CCSER2Q9H7U1 834 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP3-207ENST00000558218 SMPD4Q9NXE4 827 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 CHMP5Q9NZZ3 219 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 DNMT3LQ9UJW3 386 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 ZNF510Q9Y2H8 683 aa10.65□□□□□ -0.7
USP3-207ENST00000558218 FCF1Q9Y324 198 aaKnown RBP10.65□□□□□ -0.7
USP3-207ENST00000558218 ATG2BQ96BY7 2078 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms