RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 UTP14CQ5TAP6 766 aaKnown RBP7□□□□□ -1.29
RTF1-204ENST00000558117 HEATR3Q7Z4Q2 680 aa7□□□□□ -1.29
RTF1-204ENST00000558117 CERS3Q8IU89 383 aa7□□□□□ -1.29
RTF1-204ENST00000558117 MAPKAPK5Q8IW41 473 aa7□□□□□ -1.29
RTF1-204ENST00000558117 ADSSL1Q8N142 457 aa7□□□□□ -1.29
RTF1-204ENST00000558117 LPAR1Q92633 364 aa7□□□□□ -1.29
RTF1-204ENST00000558117 MARS2Q96GW9 593 aaKnown RBP7□□□□□ -1.29
RTF1-204ENST00000558117 FSD1Q9BTV5 496 aa7□□□□□ -1.29
RTF1-204ENST00000558117 PACSIN1Q9BY11 444 aa7□□□□□ -1.29
RTF1-204ENST00000558117 TCEAL9Q9UHQ7 104 aa7□□□□□ -1.29
RTF1-204ENST00000558117 POLHQ9Y253 713 aa7□□□□□ -1.29
RTF1-204ENST00000558117 SLC45A1Q9Y2W3 748 aa7□□□□□ -1.29
RTF1-204ENST00000558117 USP9XQ93008 2570 aaPredicted RBP6.99□□□□□ -1.29
RTF1-204ENST00000558117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.99□□□□□ -1.29
RTF1-204ENST00000558117 A0A1B0GTW7 788 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 TMEM200CA6NKL6 621 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 CXCL11O14625 94 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 SLC16A6O15403 523 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 LPXNO60711 386 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 RAMP2O60895 175 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 SLC43A1O75387 559 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 CFIP05156 583 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 SMARCA1P28370 1054 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 NBL1P41271 181 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 DPTQ07507 201 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 SLFN5Q08AF3 891 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 GTF2H3Q13889 308 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 LEXMQ3ZCV2 418 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 FAM102BQ5T8I3 360 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 ZNF627Q7L945 461 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 MRGPRGQ86SM5 289 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 ARHGEF19Q8IW93 802 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 ULK2Q8IYT8 1036 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 SH2D3CQ8N5H7 860 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 SLC35G2Q8TBE7 412 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 RNF31Q96EP0 1072 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 C1orf43Q9BWL3 253 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 CYP4F11Q9HBI6 524 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 ANKFY1Q9P2R3 1169 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 ABCF2Q9UG63 623 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 HS3ST4Q9Y661 456 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 RLFQ13129 1914 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 ECM29Q5VYK3 1845 aa6.99□□□□□ -1.29
RTF1-204ENST00000558117 ZZEF1O43149 2961 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 EPOPA6NHQ4 379 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 UNC119BA6NIH7 251 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 CYSRT1A8MQ03 144 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 TCP10L2B9ZVM9 353 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 TSPAN6O43657 245 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 ERN1O75460 977 aaKnown RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 CDKL5O76039 1030 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 AGFG2O95081 481 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 GPANK1O95872 356 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 CLTBP09497 229 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 MYBP10242 640 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 RESTQ13127 1097 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 HSP90AB3PQ58FF7 597 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 THEMIS2Q5TEJ8 643 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 NOL8Q76FK4 1167 aaKnown RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 LURAP1LQ8IV03 231 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 LCORLQ8N3X6 602 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 PPP1R35Q8TAP8 253 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 SMCR8Q8TEV9 937 aaPredicted RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 NUP133Q8WUM0 1156 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 C1GALT1C1Q96EU7 318 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 TAAR9Q96RI9 348 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 CGRRF1Q99675 332 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 ACO2Q99798 780 aaKnown RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 TTPALQ9BTX7 342 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 TDRD3Q9H7E2 651 aaKnown RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 KMT5AQ9NQR1 393 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 LMBRD1Q9NUN5 540 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 JKAMPQ9P055 326 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 DKK2Q9UBU2 259 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 DDX20Q9UHI6 824 aaKnown RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 USP25Q9UHP3 1055 aa6.98□□□□□ -1.29
RTF1-204ENST00000558117 MTO1Q9Y2Z2 717 aaKnown RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 HELZ2Q9BYK8 2649 aaKnown RBP6.98□□□□□ -1.29
RTF1-204ENST00000558117 PLXNB2O15031 1838 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 PRSS29PA6NIE9 313 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 B3GALT2O43825 422 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 SLC5A1P13866 664 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 ZKSCAN1P17029 563 aaPredicted RBP6.97□□□□□ -1.29
RTF1-204ENST00000558117 FGFR4P22455 802 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 PRDX5P30044 214 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 NKX6-1P78426 367 aaPredicted RBP6.97□□□□□ -1.29
RTF1-204ENST00000558117 HSD11B2P80365 405 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 OCA2Q04671 838 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 CCL14Q16627 93 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 HERC4Q5GLZ8 1057 aaPredicted RBP6.97□□□□□ -1.29
RTF1-204ENST00000558117 B3GNTL1Q67FW5 361 aaPredicted RBP6.97□□□□□ -1.29
RTF1-204ENST00000558117 LAIR1Q6GTX8 287 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 FASTKD5Q7L8L6 764 aaKnown RBP6.97□□□□□ -1.29
RTF1-204ENST00000558117 LDLRAD3Q86YD5 345 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 FAM90A1Q86YD7 464 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 AOPEPQ8N6M6 819 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 USP6NLQ92738 828 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 CHFRQ96EP1 664 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 PNKPQ96T60 521 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 TLR10Q9BXR5 811 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms