RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 RAD54BQ9Y620 910 aa19.44■□□□□ 0.7
ABCD4-228ENST00000557588 PRRT4C9JH25 899 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 GFRA2O00451 464 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 GREM1O60565 184 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 STAU1O95793 577 aaKnown RBP19.43■□□□□ 0.7
ABCD4-228ENST00000557588 ZNF883P0CG24 379 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 TNNC1P63316 161 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 WDR72Q3MJ13 1102 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 HTR3DQ70Z44 454 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 SLCO6A1Q86UG4 719 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 FAM35AQ86V20 835 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 SCAMP5Q8TAC9 235 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 BAHD1Q8TBE0 780 aaPredicted RBP19.43■□□□□ 0.7
ABCD4-228ENST00000557588 SCFD1Q8WVM8 642 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 XPO6Q96QU8 1125 aaKnown RBP19.43■□□□□ 0.7
ABCD4-228ENST00000557588 KCNK16Q96T55 309 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 KIAA1586Q9HCI6 787 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 DMAP1Q9NPF5 467 aaPredicted RBP19.43■□□□□ 0.7
ABCD4-228ENST00000557588 PANK4Q9NVE7 773 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 HSPBP1Q9NZL4 362 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 GMIPQ9P107 970 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 CHORDC1Q9UHD1 332 aaPredicted RBP19.43■□□□□ 0.7
ABCD4-228ENST00000557588 FBXO2Q9UK22 296 aaPredicted RBP19.43■□□□□ 0.7
ABCD4-228ENST00000557588 ATP8B3O60423 1300 aa19.43■□□□□ 0.7
ABCD4-228ENST00000557588 ASH1LQ9NR48 2969 aaKnown RBP19.42■□□□□ 0.7
ABCD4-228ENST00000557588 A0A1B0GTW7 788 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 A8MXQ7 604 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 NEDD8-MDP1E9PL57 170 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 DKK1O94907 266 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 CST3P01034 146 aaPredicted RBP19.42■□□□□ 0.7
ABCD4-228ENST00000557588 IRF1P10914 325 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 TYRP14679 529 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 CD6P30203 668 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 TXLNAP40222 546 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 KIAA1324Q6UXG2 1013 aaKnown RBP19.42■□□□□ 0.7
ABCD4-228ENST00000557588 TMPRSS7Q7RTY8 843 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 METTL3Q86U44 580 aaKnown RBP19.42■□□□□ 0.7
ABCD4-228ENST00000557588 BBS2Q9BXC9 721 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 NACA2Q9H009 215 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 COMMD8Q9NX08 183 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 CACNA2D2Q9NY47 1150 aa19.42■□□□□ 0.7
ABCD4-228ENST00000557588 USP36Q9P275 1121 aaKnown RBP19.42■□□□□ 0.7
ABCD4-228ENST00000557588 MEI4A8MW99 385 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 TLR5O60602 858 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 MAOBP27338 520 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 RABEP1Q15276 862 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 SNRNP35Q16560 246 aaKnown RBP19.41■□□□□ 0.7
ABCD4-228ENST00000557588 STXBP4Q6ZWJ1 553 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 ZCCHC9Q8N567 271 aaKnown RBP19.41■□□□□ 0.7
ABCD4-228ENST00000557588 CADM4Q8NFZ8 388 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 HNRNPLLQ8WVV9 542 aaKnown RBP19.41■□□□□ 0.7
ABCD4-228ENST00000557588 ERLEC1Q96DZ1 483 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 SMARCD1Q96GM5 515 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 CGRRF1Q99675 332 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 XYLT2Q9H1B5 865 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 TOR4AQ9NXH8 423 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 WDR35Q9P2L0 1181 aa19.41■□□□□ 0.7
ABCD4-228ENST00000557588 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
ABCD4-228ENST00000557588 FLNBO75369 2602 aaKnown RBP19.41■□□□□ 0.7
ABCD4-228ENST00000557588 CER1O95813 267 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 DLATP10515 647 aaKnown RBP19.4■□□□□ 0.7
ABCD4-228ENST00000557588 HOXD13P35453 343 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 PSMD6Q15008 389 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
ABCD4-228ENST00000557588 CCDC73Q6ZRK6 1079 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 PAQR9Q6ZVX9 377 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 GLIS3Q8NEA6 775 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 TOE1Q96GM8 510 aaKnown RBP19.4■□□□□ 0.7
ABCD4-228ENST00000557588 LRIG1Q96JA1 1093 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 TRIM9Q9C026 710 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 IL21RQ9HBE5 538 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 WSB2Q9NYS7 404 aaPredicted RBP19.4■□□□□ 0.7
ABCD4-228ENST00000557588 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
ABCD4-228ENST00000557588 NCAM1P13591 858 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 TNNI1P19237 187 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 ATICP31939 592 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 STAT6P42226 847 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 DGKGP49619 791 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 FUT11Q495W5 492 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 IL27RAQ6UWB1 636 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 CCDC65Q8IXS2 484 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 SPRYD3Q8NCJ5 442 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 SETD7Q8WTS6 366 aaKnown RBP19.39■□□□□ 0.69
ABCD4-228ENST00000557588 KLF16Q9BXK1 252 aaPredicted RBP19.39■□□□□ 0.69
ABCD4-228ENST00000557588 CYLDQ9NQC7 956 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.39■□□□□ 0.69
ABCD4-228ENST00000557588 TM7SF3Q9NS93 570 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 KRT82Q9NSB4 513 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 FNDC3AQ9Y2H6 1198 aaKnown RBP19.39■□□□□ 0.69
ABCD4-228ENST00000557588 PCDHGB2Q9Y5G2 931 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 CLIC4Q9Y696 253 aa19.39■□□□□ 0.69
ABCD4-228ENST00000557588 FLRT2O43155 660 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 CILPO75339 1184 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 CISD3P0C7P0 127 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 MATKP42679 507 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 PGFP49763 221 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 ZNF132P52740 706 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 MYL6P60660 151 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 BNC1Q01954 994 aa19.38■□□□□ 0.69
ABCD4-228ENST00000557588 CYP24A1Q07973 514 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms