RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 E2F2Q14209 437 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 LRRC24Q50LG9 513 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 TMEM196Q5HYL7 178 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 WDR45BQ5MNZ6 344 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 DEPDC1Q5TB30 811 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 TSHZ3Q63HK5 1081 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 CLEC9AQ6UXN8 241 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 CCDC129Q6ZRS4 1044 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 B4GALNT4Q76KP1 1039 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ENOSF1Q7L5Y1 443 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 R3HCC1LQ7Z5L2 792 aaKnown RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 TRABD2AQ86V40 505 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ARMC8Q8IUR7 673 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 GALNT4Q8N4A0 578 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 C11orf44Q8N8P7 122 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 USP38Q8NB14 1042 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ZMIZ2Q8NF64 920 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 LINS1Q8NG48 757 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 KCNG4Q8TDN1 519 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 KTI12Q96EK9 354 aaPredicted RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 RBM17Q96I25 401 aaKnown RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 TIGD1Q96MW7 591 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 OR14A2Q96R54 314 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ZSWIM1Q9BR11 485 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 NUDT22Q9BRQ3 303 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 ZCWPW1Q9H0M4 648 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 PRDM13Q9H4Q3 707 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 CCDC134Q9H6E4 229 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 PLEKHA2Q9HB19 425 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 LIN7CQ9NUP9 197 aaKnown RBP3.51□□□□□ -1.85
TRAV28-201ENST00000557548 TBC1D29Q9UFV1 150 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 RIMKLBQ9ULI2 386 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 NFU1Q9UMS0 254 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 SLC27A6Q9Y2P4 619 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 KCTD3Q9Y597 815 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 SNX14Q9Y5W7 946 aa3.51□□□□□ -1.85
TRAV28-201ENST00000557548 M0QYT0 321 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 LEFTY2O00292 366 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 PEX12O00623 359 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ORC4O43929 436 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CBFA2T3O75081 653 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ERN1O75460 977 aaKnown RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 IPO13O94829 963 aaKnown RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 LARGE1O95461 756 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 MYCLP12524 364 aaPredicted RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 DRD1P21728 446 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 FGFR4P22455 802 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CHMP24386 653 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CD6P30203 668 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 HOXD12P35452 270 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 PSMC2P35998 433 aaKnown RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 PBX1P40424 430 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 NPTX2P47972 431 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 NDUFV1P49821 464 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CDK7P50613 346 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 PDE6CP51160 858 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ARF3P61204 181 aaPredicted RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ARF1P84077 181 aaKnown RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 TIAL1Q01085 375 aaKnown RBP eCLIP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CAP1Q01518 475 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 NHLH2Q02577 135 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 TDGQ13569 410 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 GRM7Q14831 915 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 NFIXQ14938 502 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ZXDCQ2QGD7 858 aaPredicted RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 PREPLQ4J6C6 727 aaPredicted RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CCDC184Q52MB2 194 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 RBM20Q5T481 1227 aaKnown RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 FAM102AQ5T9C2 384 aaPredicted RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ARMC3Q5W041 872 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 METRNLQ641Q3 311 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ANO7Q6IWH7 933 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 PIK3AP1Q6ZUJ8 805 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 TMTC3Q6ZXV5 915 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 H1FNTQ75WM6 255 aaPredicted RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 RASGRP2Q7LDG7 609 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 TMPRSS9Q7Z410 1059 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 RHOT2Q8IXI1 618 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 LSMEM1Q8N8F7 131 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 FAM71DQ8N9W8 422 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 MDGA1Q8NFP4 955 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 OR56A1Q8NGH5 318 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 SUN3Q8TAQ9 357 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 SLC22A17Q8WUG5 538 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 ATRIPQ8WXE1 791 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 LMF1Q96S06 567 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 HAPLN3Q96S86 360 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 C17orf80Q9BSJ5 609 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 LMAN2LQ9H0V9 348 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 GHITMQ9H3K2 345 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 IL21RQ9HBE5 538 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 HAUS2Q9NVX0 235 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 VPS28Q9UK41 221 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CNOT6Q9ULM6 557 aaKnown RBP3.5□□□□□ -1.85
TRAV28-201ENST00000557548 SORCS3Q9UPU3 1222 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 CAMK2AQ9UQM7 478 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 SSX2IPQ9Y2D8 614 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 SH3BP1Q9Y3L3 701 aa3.5□□□□□ -1.85
TRAV28-201ENST00000557548 USP15Q9Y4E8 981 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms