RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PDCL2Q8N4E4 241 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 ALLCQ8N6M5 410 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 ARL14EPQ8N8R7 260 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-207ENST00000557470 TXNDC5Q8NBS9 432 aaKnown RBP6.27□□□□□ -1.41
VPS33B-207ENST00000557470 CCDC26Q8TAB7 109 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 WHAMMQ8TF30 809 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 LRRC15Q8TF66 581 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 LEO1Q8WVC0 666 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-207ENST00000557470 TRMT2BQ96GJ1 504 aaKnown RBP6.27□□□□□ -1.41
VPS33B-207ENST00000557470 SGSM3Q96HU1 749 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 MYRFLQ96LU7 910 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 PKMYT1Q99640 499 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 REEP2Q9BRK0 252 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 ASB7Q9H672 318 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 ABCB6Q9NP58 842 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 FSCN3Q9NQT6 498 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 GCNT4Q9P109 453 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 UXTQ9UBK9 157 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-207ENST00000557470 MYH11P35749 1972 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 PTPRDP23468 1912 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 ASH1LQ9NR48 2969 aaKnown RBP6.27□□□□□ -1.41
VPS33B-207ENST00000557470 CELSR3Q9NYQ7 3312 aa6.27□□□□□ -1.41
VPS33B-207ENST00000557470 ANKRD63C9JTQ0 380 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 SGK1O00141 431 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 HCRTO43612 131 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ALDH1A2O94788 518 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 KLF8O95600 359 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 NFATC1O95644 943 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 CYP17A1P05093 508 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 CFIP05156 583 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ATF4P18848 351 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ITPKAP23677 461 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ACAT1P24752 427 aaKnown RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF131P52739 623 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 RPL10AP62906 217 aaKnown RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ATP2C1P98194 919 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 AMPD3Q01432 767 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 SERINC3Q13530 473 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 NFE2Q16621 373 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 SV2CQ496J9 727 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 SOWAHCQ53LP3 525 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ZFYVE27Q5T4F4 411 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 PEAR1Q5VY43 1037 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 LYSMD4Q5XG99 296 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 SCARA3Q6AZY7 606 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ADALQ6DHV7 355 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 SLC23A3Q6PIS1 610 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 C19orf48Q6RUI8 117 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 CRELD2Q6UXH1 353 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 SV2AQ7L0J3 742 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 PROSER1Q86XN7 944 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 CHCHD4Q8N4Q1 142 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 MYCT1Q8N699 235 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 IL17RCQ8NAC3 791 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 HMGB4Q8WW32 186 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 CRELD1Q96HD1 420 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 CDK5RAP3Q96JB5 506 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF560Q96MR9 790 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 FIZ1Q96SL8 496 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ACBD6Q9BR61 282 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 LLPHQ9BRT6 129 aaKnown RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 GTPBP2Q9BX10 602 aaKnown RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 IKZF4Q9H2S9 585 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 PARVGQ9HBI0 331 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ZDHHC4Q9NPG8 344 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 RAB6BQ9NRW1 208 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 PILRBQ9UKJ0 227 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 GTF3C4Q9UKN8 822 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ODF2LQ9ULJ1 636 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 L1RE1Q9UN81 338 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 ARHGAP26Q9UNA1 814 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 DOLKQ9UPQ8 538 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 TNRC6BQ9UPQ9 1833 aaKnown RBP6.26□□□□□ -1.41
VPS33B-207ENST00000557470 APC2O95996 2303 aa6.26□□□□□ -1.41
VPS33B-207ENST00000557470 BPTFQ12830 3046 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 PI4KAP42356 2102 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 TCRBV21S2A2A0A5A6 115 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 FAM221BA6H8Z2 402 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 VWA3AA6NCI4 1184 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 H0Y626 953 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 LEFTY2O00292 366 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 OPHN1O60890 802 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 ADAM23O75077 832 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 KAT7O95251 611 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 TRIM16O95361 564 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 CD59P13987 128 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 HDCP19113 662 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SCP2P22307 547 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 MPSTP25325 297 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 ADSSP30520 456 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 GNA15P30679 374 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 POLR2BP30876 1174 aaKnown RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 HOXD12P35452 270 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 PNPLA4P41247 253 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 KIR2DL1P43626 348 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SLC6A11P48066 632 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 ATXN3P54252 364 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 MRPS21P82921 87 aaKnown RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 HMGN5P82970 282 aaKnown RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 TFAMQ00059 246 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms