RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 DUSP15Q9H1R2 295 aaPredicted RBP14.95□□□□□ -0.02
SNX6-210ENST00000557341 SPHK2Q9NRA0 654 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 LSM7Q9UK45 103 aaKnown RBP14.95□□□□□ -0.02
SNX6-210ENST00000557341 GOLGA6L4A6NEF3 574 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 ANTXRLA6NF34 631 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 DCLK1O15075 740 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 TULP3O75386 442 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 KLF8O95600 359 aaPredicted RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 TIE1P35590 1138 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 ATP5C1P36542 298 aaKnown RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 TNFRSF4P43489 277 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 KIR2DL1P43626 348 aaPredicted RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 PGFP49763 221 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 LIMK1P53667 647 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 MCCD1P59942 119 aaPredicted RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 BECN1Q14457 450 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 ANO4Q32M45 955 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 ZNF394Q53GI3 561 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 EOGTQ5NDL2 527 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 PLA2G2CQ5R387 149 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 PPP1R26Q5T8A7 1209 aaPredicted RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 PHTF2Q8N3S3 785 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 WHAMMQ8TF30 809 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 DDX1Q92499 740 aaKnown RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 EEF2KMTQ96G04 330 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 GSDMAQ96QA5 445 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 TSG101Q99816 390 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 FAM124BQ9H5Z6 455 aaPredicted RBP14.94□□□□□ -0.02
SNX6-210ENST00000557341 VPS45Q9NRW7 570 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 DEC1Q9P2X7 70 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 ADAMTS9Q9P2N4 1935 aa14.94□□□□□ -0.02
SNX6-210ENST00000557341 CNOT1A5YKK6 2376 aaKnown RBP14.93□□□□□ -0.02
SNX6-210ENST00000557341 A0A0A0MRY4 1105 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 SGK1O00141 431 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 SLC16A3O15427 465 aaKnown RBP14.93□□□□□ -0.02
SNX6-210ENST00000557341 TBX18O95935 607 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 CHRM1P11229 460 aaPredicted RBP14.93□□□□□ -0.02
SNX6-210ENST00000557341 PRCPP42785 496 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 PSEN1P49768 467 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 CREB5Q02930 508 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 COBLL1Q53SF7 1204 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 DCAF17Q5H9S7 520 aaPredicted RBP14.93□□□□□ -0.02
SNX6-210ENST00000557341 TCERG1LQ5VWI1 586 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 PMS2CLQ68D20 193 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 IL31Q6EBC2 164 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 KLHDC10Q6PID8 442 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 TMEM92Q6UXU6 159 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 NUDT18Q6ZVK8 323 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 HTR3DQ70Z44 454 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 CCDC186Q7Z3E2 898 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 TRMT11Q7Z4G4 463 aaKnown RBP14.93□□□□□ -0.02
SNX6-210ENST00000557341 TADA2BQ86TJ2 420 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 TTC30AQ86WT1 665 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 NAT16Q8N8M0 369 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 TERB1Q8NA31 727 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 SEMA4DQ92854 862 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 WBP2Q969T9 261 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 KLF16Q9BXK1 252 aaPredicted RBP14.93□□□□□ -0.02
SNX6-210ENST00000557341 DUSP16Q9BY84 665 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 NMUR1Q9HB89 426 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 POLMQ9NP87 494 aaPredicted RBP14.93□□□□□ -0.02
SNX6-210ENST00000557341 CISHQ9NSE2 258 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNX6-210ENST00000557341 OSER1Q9NX31 292 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 RAB20Q9NX57 234 aa14.93□□□□□ -0.02
SNX6-210ENST00000557341 CKAP5Q14008 2032 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 A0A1W2PQH9 124 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 TBC1D3BA6NDS4 549 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 NEDD8-MDP1E9PL57 170 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 SMC2O95347 1197 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 RARGP13631 454 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 HNRNPLP14866 589 aaKnown RBP eCLIP14.92□□□□□ -0.026e-14■□□□□ 8.8
SNX6-210ENST00000557341 KIF11P52732 1056 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 NUCB2P80303 420 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 PPM1JQ5JR12 505 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 C10orf120Q5SQS8 335 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 C10orf76Q5T2E6 689 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 TMEM25Q86YD3 366 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 ZNF513Q8N8E2 541 aaPredicted RBP14.92□□□□□ -0.02
SNX6-210ENST00000557341 KCNV2Q8TDN2 545 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 SPACA7Q96KW9 195 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 CDK5RAP1Q96SZ6 601 aaKnown RBP14.92□□□□□ -0.02
SNX6-210ENST00000557341 ARID3AQ99856 593 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 BCCIPQ9P287 314 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNX6-210ENST00000557341 HOOK1Q9UJC3 728 aaKnown RBP14.92□□□□□ -0.02
SNX6-210ENST00000557341 DNMT3LQ9UJW3 386 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 NAGPAQ9UK23 515 aa14.92□□□□□ -0.02
SNX6-210ENST00000557341 NYNRINQ9P2P1 1898 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 BCLAF3A2AJT9 711 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 CACNG3O60359 315 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 GREM1O60565 184 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 TYRP14679 529 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 FKBP3Q00688 224 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 LRRC63Q05C16 580 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 CBWD6Q4V339 395 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 CBWD3Q5JTY5 395 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 CBWD5Q5RIA9 395 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 EMC10Q5UCC4 262 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms