RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 KYAT1Q16773 422 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 CFAP221Q4G0U5 840 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 ADAT2Q7Z6V5 191 aaKnown RBP13.34□□□□□ -0.27
PSEN1-220ENST00000557037 CD302Q8IX05 232 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 ZNF274Q96GC6 653 aaPredicted RBP13.34□□□□□ -0.27
PSEN1-220ENST00000557037 ZNF578Q96N58 590 aaPredicted RBP13.34□□□□□ -0.27
PSEN1-220ENST00000557037 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 BRMS1Q9HCU9 246 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 SH3BP1Q9Y3L3 701 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 PCDHB1Q9Y5F3 818 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 NEDD8-MDP1E9PL57 170 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 GFRA2O00451 464 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 ATP2C2O75185 946 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 ITGAVP06756 1048 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 IRF1P10914 325 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 ABCB4P21439 1286 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 SMTNP53814 917 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 TAF10Q12962 218 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 HAUS3Q68CZ6 603 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 RINT1Q6NUQ1 792 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 C1orf186Q6ZWK4 172 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 DCBLD1Q8N8Z6 715 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 SNRNP27Q8WVK2 155 aaKnown RBP13.33□□□□□ -0.28
PSEN1-220ENST00000557037 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-220ENST00000557037 OTUB2Q96DC9 234 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 SPATA17Q96L03 361 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 NTPCRQ9BSD7 190 aaKnown RBP13.33□□□□□ -0.28
PSEN1-220ENST00000557037 C17orf75Q9HAS0 396 aa13.33□□□□□ -0.28
PSEN1-220ENST00000557037 CPSF3Q9UKF6 684 aaKnown RBP13.33□□□□□ -0.28
PSEN1-220ENST00000557037 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-220ENST00000557037 ICE1Q9Y2F5 2266 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 ENO4A6NNW6 628 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 HNRNPDLO14979 420 aaKnown RBP13.32□□□□□ -0.28
PSEN1-220ENST00000557037 PAPSS1O43252 624 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-220ENST00000557037 CDKL5O76039 1030 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 ACADMP11310 421 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 PLS3P13797 630 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 CR2P20023 1033 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 MUTP22033 750 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 BDNFP23560 247 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 ANXA13P27216 316 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 MAGEA11P43364 429 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 ACOT2P49753 483 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 INSM1Q01101 510 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-220ENST00000557037 IFRD2Q12894 506 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-220ENST00000557037 HIST2H2BCQ6DN03 193 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
PSEN1-220ENST00000557037 ORC3Q9UBD5 711 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-220ENST00000557037 MAGEC2Q9UBF1 373 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-220ENST00000557037 DERAQ9Y315 318 aa13.32□□□□□ -0.28
PSEN1-220ENST00000557037 MYH11P35749 1972 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 HUS1O60921 280 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 FSBPO95073 299 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 MT-CO3P00414 261 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 IGLV3-19P01714 112 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 AFPP02771 609 aaKnown RBP13.31□□□□□ -0.28
PSEN1-220ENST00000557037 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 TYRP14679 529 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 PSMA5P28066 241 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 ACSL1P33121 698 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 C21orf59P57076 290 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 PSMC1P62191 440 aaKnown RBP13.31□□□□□ -0.28
PSEN1-220ENST00000557037 GABREP78334 506 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 ORC1Q13415 861 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 SHBQ15464 509 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 ZNF174Q15697 407 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 TPGS1Q6ZTW0 290 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 BHMTQ93088 406 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 MYLPFQ96A32 169 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 ZNF560Q96MR9 790 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 XPO6Q96QU8 1125 aaKnown RBP13.31□□□□□ -0.28
PSEN1-220ENST00000557037 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 OSGEPQ9NPF4 335 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 LRWD1Q9UFC0 647 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 DNM3Q9UQ16 869 aa13.31□□□□□ -0.28
PSEN1-220ENST00000557037 TP53BP1Q12888 1972 aaPredicted RBP13.31□□□□□ -0.28
PSEN1-220ENST00000557037 POLQO75417 2590 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 A0A0B4J269 797 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 K7ENP7 123 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 COCHO43405 550 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 SUV39H1O43463 412 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 CACNG3O60359 315 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 DFNA5O60443 496 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
PSEN1-220ENST00000557037 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 CDC25AP30304 524 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 CCR10P46092 362 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 PPP3CCP48454 512 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 DGKGP49619 791 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 SCARA3Q6AZY7 606 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 INO80CQ6PI98 192 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-220ENST00000557037 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
PSEN1-220ENST00000557037 SAP25Q8TEE9 199 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 SNX29Q8TEQ0 813 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 BIRC7Q96CA5 298 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 ELF4Q99607 663 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms