RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 PTPRAP18433 802 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 RPL3P39023 403 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 PKN2Q16513 984 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 TMA16Q96EY4 203 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 SLC13A1Q9BZW2 595 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEK9-210ENST00000557026 ATRNO75882 1429 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 PYGMP11217 842 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 GRK2P25098 689 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 RRM2P31350 389 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 AIF1P55008 147 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 ANTXR2P58335 489 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 MAGOHP61326 146 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 PTK7Q13308 1070 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 FAM110CQ1W6H9 321 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 FAM171A1Q5VUB5 890 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 CDK20Q8IZL9 346 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 AHCYL2Q96HN2 611 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 TBC1D14Q9P2M4 693 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEK9-210ENST00000557026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 CLK3P49761 638 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 NR1I3Q14994 352 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 PAN2Q504Q3 1202 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 PRAMEF18Q5VWM3 479 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 SIKE1Q9BRV8 207 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 WARS2Q9UGM6 360 aaKnown RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 AP4E1Q9UPM8 1137 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 TKTL1P51854 596 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 THOP1P52888 689 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 STK4Q13043 487 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ALG11Q2TAA5 492 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 LRRC43Q8N309 656 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ILKAPQ9H0C8 392 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 SENP2Q9HC62 589 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 SAE1Q9UBE0 346 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ARHGEF9O43307 516 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 PCDH8O95206 1070 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 CHGBP05060 677 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 MPOP05164 745 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 TPBGLP0DKB5 382 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 HOXB6P17509 224 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 BRD2P25440 801 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 GTF2E2P29084 291 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 MAGEA4P43358 317 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 BEND6Q5SZJ8 279 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 ATAD3BQ5T9A4 648 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 SCARA3Q6AZY7 606 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 TRMT11Q7Z4G4 463 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 UBA3Q8TBC4 463 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 GLIS2Q9BZE0 524 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 CCDC134Q9H6E4 229 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 WHRNQ9P202 907 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 TMCC3Q9ULS5 477 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 RNF112Q9ULX5 631 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 IQGAP1P46940 1657 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 CYP1A1P04798 512 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 COMTP21964 271 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ATP5C1P36542 298 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 CRYBB1P53674 252 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 SNRPD1P62314 119 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 GRIK3Q13003 919 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 PCSK7Q16549 785 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 CLEC16AQ2KHT3 1053 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 HORMAD1Q86X24 394 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 PALB2Q86YC2 1186 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 SLC25A41Q8N5S1 370 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ZNF333Q96JL9 665 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 ZSWIM1Q9BR11 485 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 AVENQ9NQS1 362 aaPredicted RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 TNFSF13BQ9Y275 285 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 YWHAZP63104 245 aaKnown RBP12.33□□□□□ -0.44
NEK9-210ENST00000557026 CDH17Q12864 832 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 C11orf63Q6NUN7 778 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 OSBPL1AQ9BXW6 950 aa12.33□□□□□ -0.44
NEK9-210ENST00000557026 RAD51BO15315 384 aa12.32□□□□□ -0.44
NEK9-210ENST00000557026 KATNA1O75449 491 aa12.32□□□□□ -0.44
NEK9-210ENST00000557026 PROSCO94903 275 aa12.32□□□□□ -0.44
NEK9-210ENST00000557026 HTR1BP28222 390 aa12.32□□□□□ -0.44
NEK9-210ENST00000557026 HTR7P34969 479 aa12.32□□□□□ -0.44
NEK9-210ENST00000557026 GPC1P35052 558 aa12.32□□□□□ -0.44
NEK9-210ENST00000557026 HIBCHQ6NVY1 386 aaPredicted RBP12.32□□□□□ -0.44
NEK9-210ENST00000557026 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms