RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-208	ENST00000556956	EHD2	Q9NZN4	543 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	AIPL1	Q9NZN9	384 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	SUCLA2	Q9P2R7	463 aa	Predicted RBP	3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	CNOT8	Q9UFF9	292 aa	Known RBP	3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	NDOR1	Q9UHB4	597 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	RASAL2	Q9UJF2	1139 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	FBXL5	Q9UKA1	691 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	INTU	Q9ULD6	942 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	SLC12A4	Q9UP95	1085 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	ATP6V0A2	Q9Y487	856 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	TCAF1	Q9Y4C2	921 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	CACNA1F	O60840	1977 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	TNKS	O95271	1327 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	PIK3C2A	O00443	1686 aa		3.08	□□□□□ -1.92
SLIRP-208	ENST00000556956	ABCA3	Q99758	1704 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	TRPM3	Q9HCF6	1732 aa	Predicted RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	KDM3B	Q7LBC6	1761 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	SPEF2	Q9C093	1822 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ESYT3	A0FGR9	886 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FAM90A27P	A6NNH2	459 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ZNF561-AS1	K7EIQ3	104 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956		O00370	1275 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MPHOSPH10	O00566	681 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PODXL	O00592	558 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MUSK	O15146	869 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MAFG	O15525	162 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	GPR42	O15529	346 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	DAPK3	O43293	454 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	SLC26A4	O43511	780 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	KCNQ2	O43526	872 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PRKAB2	O43741	272 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PDE8A	O60658	829 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	SMIM24	O75264	130 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	GFPT2	O94808	682 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PLEKHA8P1	O95397	391 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	A1BG	P04217	495 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MME	P08473	750 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	NUDT17	P0C025	328 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	OR52Z1	P0C646	297 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	C6orf222	P0C671	652 aa	Predicted RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ATP2A2	P16615	1042 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	HSPA6	P17066	643 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	KCNA6	P17658	529 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FGFR2	P21802	821 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	KLRC1	P26715	233 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ALDH3A1	P30838	453 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FLT3	P36888	993 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	SKIV2L2	P42285	1042 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	EPS15	P42566	896 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	SLC1A4	P43007	532 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MSH2	P43246	934 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MMP13	P45452	471 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PHKA1	P46020	1223 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	GCLC	P48506	637 aa	Predicted RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	RASSF2	P50749	326 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PAPOLA	P51003	745 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	JAM2	P57087	298 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	RNASE9	P60153	205 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	RAC3	P60763	192 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MRPS35	P82673	323 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MXRA7	P84157	204 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FKBP3	Q00688	224 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ROR2	Q01974	943 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	CCDC15	Q0P6D6	951 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	BNIP1	Q12981	228 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	STK4	Q13043	487 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	DHX34	Q14147	1143 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	RASA3	Q14644	834 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	NPY5R	Q15761	445 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	GALNTL6	Q49A17	601 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FAM133B	Q5BKY9	247 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	TRIM61	Q5EBN2	209 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	WASHC2D	Q5SRD0	308 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FAM83B	Q5T0W9	1011 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FOXB2	Q5VYV0	432 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	KRT28	Q7Z3Y7	464 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PEX26	Q7Z412	305 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	DDX53	Q86TM3	631 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	VPS36	Q86VN1	386 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	PTRH1	Q86Y79	214 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	LRRC34	Q8IZ02	419 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	MYOCD	Q8IZQ8	938 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ARHGAP18	Q8N392	663 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	LCORL	Q8N3X6	602 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	SRBD1	Q8N5C6	995 aa	Known RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	METTL13	Q8N6R0	699 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ANKRD13C	Q8N6S4	541 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	C2orf69	Q8N8R5	385 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	ENAH	Q8N8S7	591 aa	Predicted RBP	3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	GSTCD	Q8NEC7	633 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	NUDT10	Q8NFP7	164 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	OR2W6P	Q8NHA6	318 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	NEK9	Q8TD19	979 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	AGAP11	Q8TF27	550 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	FBXO41	Q8TF61	875 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	DYDC1	Q8WWB3	177 aa		3.07	□□□□□ -1.92
SLIRP-208	ENST00000556956	TBC1D5	Q92609	795 aa		3.07	□□□□□ -1.92

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