RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ING5Q8WYH8 240 aa18.25■□□□□ 0.51
TUBB3-211ENST00000556536 WDR6Q9NNW5 1121 aaKnown RBP18.25■□□□□ 0.51
TUBB3-211ENST00000556536 TLR8Q9NR97 1041 aaKnown RBP18.25■□□□□ 0.51
TUBB3-211ENST00000556536 MYO1AQ9UBC5 1043 aa18.25■□□□□ 0.51
TUBB3-211ENST00000556536 CNOT8Q9UFF9 292 aaKnown RBP18.25■□□□□ 0.51
TUBB3-211ENST00000556536 TFR2Q9UP52 801 aa18.25■□□□□ 0.51
TUBB3-211ENST00000556536 MRPS23Q9Y3D9 190 aaKnown RBP18.25■□□□□ 0.51
TUBB3-211ENST00000556536 USP15Q9Y4E8 981 aaPredicted RBP18.25■□□□□ 0.51
TUBB3-211ENST00000556536 PCDHA13Q9Y5I0 950 aa18.25■□□□□ 0.51
TUBB3-211ENST00000556536 CLUHO75153 1309 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 ANKRD62A6NC57 917 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 FAM86C2PA6NEL3 165 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 ZNF197O14709 1029 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 SART1O43290 800 aaKnown RBP18.24■□□□□ 0.51
TUBB3-211ENST00000556536 LTFP02788 710 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 FYNP06241 537 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 CEBPBP17676 345 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 FSHRP23945 695 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 SPA17Q15506 151 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 EFHC1Q5JVL4 640 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 SNX30Q5VWJ9 437 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 DNAJC24Q6P3W2 148 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 POTEHQ6S545 545 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 SLC26A9Q7LBE3 791 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 ARHGAP18Q8N392 663 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 C3orf20Q8ND61 904 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 SUSD6Q92537 303 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 EDEM1Q92611 657 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 FAM149B1Q96BN6 582 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 TRIM11Q96F44 468 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 RIPOR3Q96MK2 946 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 GCNAQ96QF7 691 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 CCSER2Q9H7U1 834 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 METTL5Q9NRN9 209 aaKnown RBP18.24■□□□□ 0.51
TUBB3-211ENST00000556536 ASNSD1Q9NWL6 643 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 WDR35Q9P2L0 1181 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 TMEM59LQ9UK28 342 aa18.24■□□□□ 0.51
TUBB3-211ENST00000556536 C2orf78A6NCI8 922 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 TMEM253P0C7T8 217 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 MYBL1P10243 752 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 RARGP13631 454 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 SCNN1AP37088 669 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 MTHFRP42898 656 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 PPP3CCP48454 512 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 RNASE9P60153 205 aaKnown RBP18.23■□□□□ 0.51
TUBB3-211ENST00000556536 YWHAZP63104 245 aaKnown RBP18.23■□□□□ 0.51
TUBB3-211ENST00000556536 GPC5P78333 572 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 MAMLD1Q13495 774 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 PPP1R15BQ5SWA1 713 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 C10orf76Q5T2E6 689 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 BTBD8Q5XKL5 378 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 TXNDC8Q6A555 127 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 PLEKHA7Q6IQ23 1121 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 JOSD2Q8TAC2 188 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 POMKQ9H5K3 350 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.23■□□□□ 0.51
TUBB3-211ENST00000556536 CLIC5Q9NZA1 410 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 NUDT5Q9UKK9 219 aa18.23■□□□□ 0.51
TUBB3-211ENST00000556536 RCCD1A6NED2 376 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 MBTPS2O43462 519 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 HSF2BPO75031 334 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 TBX18O95935 607 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 CYP1A2P05177 515 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 GLI1P08151 1106 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 KRT3P12035 628 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 PSEN1P49768 467 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 SMAD4Q13485 552 aaKnown RBP18.22■□□□□ 0.51
TUBB3-211ENST00000556536 GPR158Q5T848 1215 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 SYPL2Q5VXT5 272 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 TRNP1Q6NT89 227 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 GET4Q7L5D6 327 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-211ENST00000556536 DEFB106AQ8N104 65 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 EMC1Q8N766 993 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-211ENST00000556536 CTNNBL1Q8WYA6 563 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-211ENST00000556536 MRPS31Q92665 395 aaKnown RBP18.22■□□□□ 0.51
TUBB3-211ENST00000556536 GOLGA1Q92805 767 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 ZSWIM3Q96MP5 696 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 SLC2A13Q96QE2 648 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 SLC22A12Q96S37 553 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 SELENOOQ9BVL4 669 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 SLC46A2Q9BY10 475 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 POPDC2Q9HBU9 364 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 TRPC7Q9HCX4 862 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 ABCC13Q9NSE7 274 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 PARVAQ9NVD7 372 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 NAALADL1Q9UQQ1 740 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 ADGRG1Q9Y653 693 aa18.22■□□□□ 0.51
TUBB3-211ENST00000556536 A0A0U1RQJ8 604 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 SIGLEC16A6NMB1 481 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 PRR33A8MZF0 331 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 MDM4O15151 490 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 COCHO43405 550 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 NRDCO43847 1150 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 TLR5O60602 858 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 DAB1O75553 588 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 IPO7O95373 1038 aaKnown RBP18.21■□□□□ 0.51
TUBB3-211ENST00000556536 OAS1P00973 400 aaKnown RBP18.21■□□□□ 0.51
TUBB3-211ENST00000556536 NCAM1P13591 858 aa18.21■□□□□ 0.51
TUBB3-211ENST00000556536 RFC1P35251 1148 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms