RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TUBP50607 506 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 NDUFA8P51970 172 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 SHC2P98077 582 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 PPP3CAQ08209 521 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 MIB1Q86YT6 1006 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 CCDC26Q8TAB7 109 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 ERLEC1Q96DZ1 483 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 KLF16Q9BXK1 252 aaPredicted RBP14.05□□□□□ -0.16
TGFB3-204ENST00000556285 SPHK2Q9NRA0 654 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 MBD1Q9UIS9 605 aaPredicted RBP14.05□□□□□ -0.16
TGFB3-204ENST00000556285 NUDT5Q9UKK9 219 aa14.05□□□□□ -0.16
TGFB3-204ENST00000556285 CIZ1Q9ULV3 898 aaPredicted RBP14.05□□□□□ -0.16
TGFB3-204ENST00000556285 MDM4O15151 490 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 CYP26A1O43174 497 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 HOXC11O43248 304 aaPredicted RBP14.04□□□□□ -0.16
TGFB3-204ENST00000556285 TLR5O60602 858 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 P2RY2P41231 377 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 WASP42768 502 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 TNFRSF4P43489 277 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 GCLMP48507 274 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 DHPSP49366 369 aaPredicted RBP14.04□□□□□ -0.16
TGFB3-204ENST00000556285 VAMP7P51809 220 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 GAD2Q05329 585 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 ANO4Q32M45 955 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 CLEC20AQ6ZU45 233 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 ARMCX6Q7L4S7 300 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 TAS1R2Q8TE23 839 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 WHAMMQ8TF30 809 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 HMGB4Q8WW32 186 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 DDX1Q92499 740 aaKnown RBP14.04□□□□□ -0.16
TGFB3-204ENST00000556285 P2RY11Q96G91 374 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 TMEM121BQ9BXQ6 578 aaPredicted RBP14.04□□□□□ -0.16
TGFB3-204ENST00000556285 MMRN2Q9H8L6 949 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 NMUR1Q9HB89 426 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 FSCN3Q9NQT6 498 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 COMMD8Q9NX08 183 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 TRAF3IP3Q9Y228 551 aa14.04□□□□□ -0.16
TGFB3-204ENST00000556285 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 TCRBV21S2A2A0A5A6 115 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 TBC1D3BA6NDS4 549 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 IKBKBO14920 756 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 P4HA1P13674 534 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 CD58P19256 250 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 PTGER3P43115 390 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 SYKP43405 635 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 NOVA1P51513 510 aaKnown RBP14.03□□□□□ -0.16
TGFB3-204ENST00000556285 IRX4P78413 519 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 INCA1Q0VD86 236 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 DPYDQ12882 1025 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 MAP7D1Q3KQU3 841 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 EOGTQ5NDL2 527 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 CYP2U1Q7Z449 544 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 UNC93AQ86WB7 457 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 TMEFF1Q8IYR6 380 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 PIGKQ92643 395 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 TAF4BQ92750 862 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 OTUB2Q96DC9 234 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 ACOX2Q99424 681 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 HNRNPABQ99729 332 aaKnown RBP14.03□□□□□ -0.16
TGFB3-204ENST00000556285 NACA2Q9H009 215 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 TLR8Q9NR97 1041 aaKnown RBP14.03□□□□□ -0.16
TGFB3-204ENST00000556285 TMEM74BQ9NUR3 256 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 BCCIPQ9P287 314 aaKnown RBP eCLIP14.03□□□□□ -0.16
TGFB3-204ENST00000556285 USP25Q9UHP3 1055 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 SCML2Q9UQR0 700 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 FRMD4BQ9Y2L6 1034 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 ATXN2Q99700 1313 aaKnown RBP14.03□□□□□ -0.16
TGFB3-204ENST00000556285 PCNX2A6NKB5 2137 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 CEP295Q9C0D2 2601 aa14.03□□□□□ -0.16
TGFB3-204ENST00000556285 FAM237AA0A1B0GTK4 181 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 A0A1W2PQH9 124 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.02□□□□□ -0.17
TGFB3-204ENST00000556285 KHNYNO15037 678 aaKnown RBP14.02□□□□□ -0.17
TGFB3-204ENST00000556285 CALUO43852 315 aaPredicted RBP14.02□□□□□ -0.17
TGFB3-204ENST00000556285 ALDH1A2O94788 518 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 RHOBTB3O94955 611 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 FAM200BP0CF97 657 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 ACO1P21399 889 aaKnown RBP14.02□□□□□ -0.17
TGFB3-204ENST00000556285 NR2F2P24468 414 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 C10orf76Q5T2E6 689 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 BTBD8Q5XKL5 378 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 EGFLAMQ63HQ2 1017 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 TPGS1Q6ZTW0 290 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 TOGARAM2Q6ZUX3 1019 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 HTR3DQ70Z44 454 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 SCD5Q86SK9 330 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 PGBD3Q8N328 593 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 DEFB119Q8N690 84 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 ZNF513Q8N8E2 541 aaPredicted RBP14.02□□□□□ -0.17
TGFB3-204ENST00000556285 TERB1Q8NA31 727 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 CYFIP2Q96F07 1278 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 EEF2KMTQ96G04 330 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 FBXO44Q9H4M3 255 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 CYLDQ9NQC7 956 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 DEC1Q9P2X7 70 aa14.02□□□□□ -0.17
TGFB3-204ENST00000556285 NEDD8-MDP1E9PL57 170 aa14.01□□□□□ -0.17
TGFB3-204ENST00000556285 CILPO75339 1184 aa14.01□□□□□ -0.17
TGFB3-204ENST00000556285 GABRG2P18507 467 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms