RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 TBC1D3BA6NDS4 549 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 DCLK1O15075 740 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 CETN3O15182 167 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 CYP26A1O43174 497 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 EPB41P11171 864 aaKnown RBP22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 ACO1P21399 889 aaKnown RBP22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 KIR2DL1P43626 348 aaPredicted RBP22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 PSEN1P49768 467 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 CREB5Q02930 508 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 KLHDC10Q6PID8 442 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 MDGA1Q8NFP4 955 aa22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 KLF16Q9BXK1 252 aaPredicted RBP22.77■■□□□ 1.24
SDR39U1-216ENST00000556175 HHLA1C9JL84 531 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 TULP3O75386 442 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 PMS2CLQ68D20 193 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 GPRIN1Q7Z2K8 1008 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 TTC30AQ86WT1 665 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 PHTF2Q8N3S3 785 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 FBXL13Q8NEE6 735 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 WHAMMQ8TF30 809 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 SPACA7Q96KW9 195 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 CDK5RAP1Q96SZ6 601 aaKnown RBP22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 TSG101Q99816 390 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 DUSP16Q9BY84 665 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 GDPD2Q9HCC8 539 aa22.76■■□□□ 1.23
SDR39U1-216ENST00000556175 MYOFQ9NZM1 2061 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 BCLAF3A2AJT9 711 aaKnown RBP22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 GOLGA6L4A6NEF3 574 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 SGK1O00141 431 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 ADRB1P08588 477 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 RARGP13631 454 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 PGFP49763 221 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 MESP2Q0VG99 397 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 BYSLQ13895 437 aaKnown RBP22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 TMEM92Q6UXU6 159 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 CCDC186Q7Z3E2 898 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 TMEM25Q86YD3 366 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 NAT16Q8N8M0 369 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 TERB1Q8NA31 727 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 XPO6Q96QU8 1125 aaKnown RBP22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 GTPBP4Q9BZE4 634 aaKnown RBP22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 BCCIPQ9P287 314 aaKnown RBP eCLIP22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 WDR35Q9P2L0 1181 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 DNMT3LQ9UJW3 386 aa22.75■■□□□ 1.23
SDR39U1-216ENST00000556175 CAVIN2O95810 425 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 TBX18O95935 607 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 CHRM1P11229 460 aaPredicted RBP22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 PLA2G4AP47712 749 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 KIF11P52732 1056 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 C10orf76Q5T2E6 689 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 STPG1Q5TH74 334 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 GRAMD4Q6IC98 578 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 SFTPA1Q8IWL2 248 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 SMYD4Q8IYR2 804 aaPredicted RBP22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 ZNF276Q8N554 614 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 ZNF513Q8N8E2 541 aaPredicted RBP22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 OLIG1Q8TAK6 271 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 HEXIM2Q96MH2 286 aaKnown RBP22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 GSDMAQ96QA5 445 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 OSER1Q9NX31 292 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 RAB20Q9NX57 234 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 MARK1Q9P0L2 795 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 NAGPAQ9UK23 515 aa22.74■■□□□ 1.23
SDR39U1-216ENST00000556175 A0A1W2PQH9 124 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 ANTXRLA6NF34 631 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 SLC16A3O15427 465 aaKnown RBP22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 GREM1O60565 184 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 SMC2O95347 1197 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 RALAP11233 206 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 SLC8A3P57103 927 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 PNOCQ13519 176 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 BECN1Q14457 450 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 COBLL1Q53SF7 1204 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 C10orf120Q5SQS8 335 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 PPP1R26Q5T8A7 1209 aaPredicted RBP22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 ZNF658Q5TYW1 1059 aaPredicted RBP22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 WBP2Q969T9 261 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 BBS2Q9BXC9 721 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 SMOC1Q9H4F8 434 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 NMUR1Q9HB89 426 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 CISHQ9NSE2 258 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 DNAJC17Q9NVM6 304 aaKnown RBP22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 CLIC5Q9NZA1 410 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 HOOK1Q9UJC3 728 aaKnown RBP22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 INVSQ9Y283 1065 aa22.73■■□□□ 1.23
SDR39U1-216ENST00000556175 NEDD8-MDP1E9PL57 170 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 CACNG3O60359 315 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 HNRNPLP14866 589 aaKnown RBP eCLIP22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 ZNF394Q53GI3 561 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 EMC10Q5UCC4 262 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 RNF43Q68DV7 783 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 CYP2U1Q7Z449 544 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 FMR1NBQ8N0W7 255 aaPredicted RBP22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 ARHGAP18Q8N392 663 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 SEMA4DQ92854 862 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 TMEM176AQ96HP8 235 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 UBXN6Q9BZV1 441 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 RXFP3Q9NSD7 469 aa22.72■■□□□ 1.23
SDR39U1-216ENST00000556175 STARD13Q9Y3M8 1113 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms