RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KCNJ11Q14654 390 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 SPRED3Q2MJR0 410 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 NBPF20Q3BBV1 942 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 KIAA0319Q5VV43 1072 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 GDF6Q6KF10 455 aaPredicted RBP25.27■■□□□ 1.64
TMEM260-207ENST00000555497 TAF2Q6P1X5 1199 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 PIGZQ86VD9 579 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 TOP6BLQ8N6T0 577 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 CCDC185Q8N715 623 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 CKAP2Q8WWK9 683 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 HSFY1Q96LI6 401 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 ELAC2Q9BQ52 826 aaKnown RBP25.27■■□□□ 1.64
TMEM260-207ENST00000555497 ZNF670Q9BS34 389 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 OSBPL7Q9BZF2 842 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 NRDE2Q9H7Z3 1164 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 ST3GAL5Q9UNP4 418 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 SCN10AQ9Y5Y9 1956 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 TCP11X1B4DZS4 312 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 PGK1P00558 417 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 RARBP10826 455 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 CYP2F1P24903 491 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 SCNN1AP37088 669 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 EFHC2Q5JST6 749 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 ARCQ7LC44 396 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 TAX1BP1Q86VP1 789 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 TNIP3Q96KP6 325 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 HNRNPABQ99729 332 aaKnown RBP25.27■■□□□ 1.64
TMEM260-207ENST00000555497 DHX35Q9H5Z1 703 aaKnown RBP25.27■■□□□ 1.64
TMEM260-207ENST00000555497 ZFYVE28Q9HCC9 887 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 CYLDQ9NQC7 956 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 SPAG7O75391 227 aa25.26■■□□□ 1.63
TMEM260-207ENST00000555497 ACADSBP45954 432 aa25.26■■□□□ 1.63
TMEM260-207ENST00000555497 SLC10A2Q12908 348 aaPredicted RBP25.26■■□□□ 1.63
TMEM260-207ENST00000555497 DPYSL2Q16555 572 aa25.26■■□□□ 1.63
TMEM260-207ENST00000555497 C3orf62Q6ZUJ4 267 aa25.26■■□□□ 1.63
TMEM260-207ENST00000555497 GTF2IRD1Q9UHL9 959 aa25.26■■□□□ 1.63
TMEM260-207ENST00000555497 XPO1O14980 1071 aaKnown RBP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 CTSHP09668 335 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 RNASELQ05823 741 aaKnown RBP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 VSIG1Q86XK7 387 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 ATP11CQ8NB49 1132 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 RTP4Q96DX8 246 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 KCTD15Q96SI1 283 aaPredicted RBP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 ARHGAP39Q9C0H5 1083 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 MIOSQ9NXC5 875 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 AP4E1Q9UPM8 1137 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 CHRNA1P02708 482 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 SLC10A3P09131 477 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 PTPN1P18031 435 aaKnown RBP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 MLH1P40692 756 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 PITX1P78337 314 aaPredicted RBP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 ADIGQ0VDE8 80 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 PDIK1LQ8N165 341 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 AGGF1Q8N302 714 aaeCLIP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 CCDC197Q8NCU1 140 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 FBF1Q8TES7 1133 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 LPPQ93052 612 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 MTG1Q9BT17 334 aaPredicted RBP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 DUSP16Q9BY84 665 aa25.25■■□□□ 1.63
TMEM260-207ENST00000555497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.25■■□□□ 1.63
TMEM260-207ENST00000555497 A0A1W2PPM1 405 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 NDUFV1P49821 464 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 WDR4P57081 412 aaKnown RBP25.24■■□□□ 1.63
TMEM260-207ENST00000555497 GJA9P57773 515 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 GBE1Q04446 702 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 DEFB106AQ8N104 65 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 PYROXD2Q8N2H3 581 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 CCDC33Q8N5R6 958 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 GAD1Q99259 594 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 NCAPGQ9BPX3 1015 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 TRABDQ9H4I3 376 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 RAB6BQ9NRW1 208 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 FGFR1OP2Q9NVK5 253 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 SLC24A2Q9UI40 661 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 CHMP2BQ9UQN3 213 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 TRPV2Q9Y5S1 764 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 BCLAF3A2AJT9 711 aaKnown RBP25.24■■□□□ 1.63
TMEM260-207ENST00000555497 SMAPO00193 183 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 GABRDO14764 452 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 AVILO75366 819 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 CYBAP13498 195 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 DESP17661 470 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 RDXP35241 583 aaKnown RBP25.24■■□□□ 1.63
TMEM260-207ENST00000555497 RABGGTBP53611 331 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 FAXCQ5TGI0 409 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 MICALL1Q8N3F8 863 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 ZIC5Q96T25 663 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 TSPYL2Q9H2G4 693 aaPredicted RBP25.24■■□□□ 1.63
TMEM260-207ENST00000555497 FAM105AQ9NUU6 356 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 MFHAS1Q9Y4C4 1052 aa25.24■■□□□ 1.63
TMEM260-207ENST00000555497 ELK3P41970 407 aa25.23■■□□□ 1.63
TMEM260-207ENST00000555497 GEMIN4P57678 1058 aaKnown RBP25.23■■□□□ 1.63
TMEM260-207ENST00000555497 NR1H3Q13133 447 aa25.23■■□□□ 1.63
TMEM260-207ENST00000555497 OTUD1Q5VV17 481 aaPredicted RBP25.23■■□□□ 1.63
TMEM260-207ENST00000555497 PPM1EQ8WY54 764 aa25.23■■□□□ 1.63
TMEM260-207ENST00000555497 TRIB2Q92519 343 aa25.23■■□□□ 1.63
TMEM260-207ENST00000555497 GABRQQ9UN88 632 aa25.23■■□□□ 1.63
TMEM260-207ENST00000555497 ZNF638Q14966 1978 aaKnown RBP25.23■■□□□ 1.63
TMEM260-207ENST00000555497 ZNF487B1APH4 448 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 ZBED1O96006 694 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms