RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 LTFP02788 710 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 MYBL1P10243 752 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 RALAP11233 206 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 BMP1P13497 986 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 RARGP13631 454 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 IL9P15248 144 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 HDCP19113 662 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 SLC7A9P82251 487 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 CYP4F8P98187 520 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 C2CD6Q53TS8 623 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 CCDC122Q5T0U0 273 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 STXBP5Q5T5C0 1151 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 GPR158Q5T848 1215 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 BTBD8Q5XKL5 378 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 OR6B2Q6IFH4 312 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 GET4Q7L5D6 327 aaPredicted RBP13.29□□□□□ -0.28
SYNE2-219ENST00000555323 LRRC8AQ8IWT6 810 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 CMTM8Q8IZV2 173 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 PIWIL1Q96J94 861 aaKnown RBP13.29□□□□□ -0.28
SYNE2-219ENST00000555323 ASB2Q96Q27 587 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 C11orf70Q9BRQ4 267 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 POPDC2Q9HBU9 364 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 TMEM59LQ9UK28 342 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 EPN1Q9Y6I3 576 aaPredicted RBP13.29□□□□□ -0.28
SYNE2-219ENST00000555323 ZNF638Q14966 1978 aaKnown RBP13.29□□□□□ -0.28
SYNE2-219ENST00000555323 ANKRD62A6NC57 917 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 SIGLEC16A6NMB1 481 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 TMCO5BA8MYB1 307 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 EIF3CLB5ME19 914 aaKnown RBP13.28□□□□□ -0.28
SYNE2-219ENST00000555323 ZNF263O14978 683 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 COCHO43405 550 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 HSF2BPO75031 334 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 ABL1P00519 1130 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 TCF3P15923 654 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 ATP5C1P36542 298 aaKnown RBP13.28□□□□□ -0.28
SYNE2-219ENST00000555323 KCNQ1P51787 676 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 EIF4EBP2Q13542 120 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-219ENST00000555323 TAF5Q15542 800 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 MSANTD2Q6P1R3 559 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 TADA2BQ86TJ2 420 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 ZDHHC14Q8IZN3 488 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 ING5Q8WYH8 240 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 ACSF2Q96CM8 615 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-219ENST00000555323 TRIM11Q96F44 468 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 SLC2A13Q96QE2 648 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 SLC22A12Q96S37 553 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 CYP2S1Q96SQ9 504 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 EIF3CQ99613 913 aaKnown RBP13.28□□□□□ -0.28
SYNE2-219ENST00000555323 OLA1Q9NTK5 396 aaKnown RBP13.28□□□□□ -0.28
SYNE2-219ENST00000555323 NR2E1Q9Y466 385 aa13.28□□□□□ -0.28
SYNE2-219ENST00000555323 TRAV19A0A0A6YYK7 116 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 LOC730098B7Z3J9 87 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 ANHXE9PGG2 379 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 TBX18O95935 607 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 KRT3P12035 628 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 RRM1P23921 792 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 GBP2P32456 591 aaPredicted RBP13.27□□□□□ -0.29
SYNE2-219ENST00000555323 NOS2P35228 1153 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 CYLC1P35663 651 aaPredicted RBP13.27□□□□□ -0.29
SYNE2-219ENST00000555323 GALCP54803 685 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 MAMLD1Q13495 774 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 SYPL2Q5VXT5 272 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 ARID3BQ8IVW6 561 aaPredicted RBP13.27□□□□□ -0.29
SYNE2-219ENST00000555323 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 KIAA1958Q8N8K9 716 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 ARL14EPQ8N8R7 260 aaPredicted RBP13.27□□□□□ -0.29
SYNE2-219ENST00000555323 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
SYNE2-219ENST00000555323 GOLGA1Q92805 767 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 SMARCD2Q92925 531 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 NT5C3BQ969T7 300 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 NXPE3Q969Y0 559 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 E2F7Q96AV8 911 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 FAM149B1Q96BN6 582 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 CCSER2Q9H7U1 834 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 PARVAQ9NVD7 372 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 OBP2AQ9NY56 170 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 DNMT3LQ9UJW3 386 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 ARHGAP26Q9UNA1 814 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 NAALADL1Q9UQQ1 740 aa13.27□□□□□ -0.29
SYNE2-219ENST00000555323 SOWAHDA6NJG2 315 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 NDUFA10O95299 355 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 NCAM1P13591 858 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 AVPR1AP37288 418 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 MATKP42679 507 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 GPC5P78333 572 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 ZXDBP98169 803 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms