RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 KCNU1A8MYU2 1149 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 H3BML4 177 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 EXOC3O60645 756 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 BCAR3O75815 825 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CBSLP0DN79 551 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 ADORA2AP29274 412 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CBSP35520 551 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CHKAP35790 457 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 ARHGAP25P42331 645 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CCT5P48643 541 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CCT4P50991 539 aaKnown RBP6.17□□□□□ -1.42
VRK1-203ENST00000555067 DGKEP52429 567 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 SEMA5AQ13591 1074 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 LAMB3Q13751 1172 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 DAZAP2Q15038 168 aaPredicted RBP6.17□□□□□ -1.42
VRK1-203ENST00000555067 TRIP6Q15654 476 aaKnown RBP6.17□□□□□ -1.42
VRK1-203ENST00000555067 ZNF783Q6ZMS7 281 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 ZNF280BQ86YH2 543 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CNGA4Q8IV77 575 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 IZUMO1Q8IYV9 350 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 ABRAQ8N0Z2 381 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CCDC89Q8N998 374 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 DEPTORQ8TB45 409 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 KBTBD7Q8WVZ9 684 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 CCT6BQ92526 530 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 RSPRY1Q96DX4 576 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 LENG8Q96PV6 779 aaPredicted RBP6.17□□□□□ -1.42
VRK1-203ENST00000555067 EIF2AK1Q9BQI3 630 aaKnown RBP6.17□□□□□ -1.42
VRK1-203ENST00000555067 TMEM79Q9BSE2 394 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 TRIM54Q9BYV2 358 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 WDR12Q9GZL7 423 aaKnown RBP6.17□□□□□ -1.42
VRK1-203ENST00000555067 PGAP2Q9UHJ9 254 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 WDR17Q8IZU2 1322 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 TUSC2O75896 110 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 PDE8BO95263 885 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 TNFAIP3P21580 790 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 ARFIP2P53365 341 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 FHL1Q13642 323 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 ZIK1Q3SY52 487 aaPredicted RBP6.16□□□□□ -1.42
VRK1-203ENST00000555067 HYIQ5T013 277 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 PXDC1Q5TGL8 231 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 MZT2AQ6P582 158 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 SERPINA13PQ6UXR4 307 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 CAND1Q86VP6 1230 aaKnown RBP6.16□□□□□ -1.42
VRK1-203ENST00000555067 SUGP1Q8IWZ8 645 aaKnown RBP6.16□□□□□ -1.42
VRK1-203ENST00000555067 DNAJC5GQ8N7S2 189 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 SPATA5Q8NB90 893 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 P2RX7Q99572 595 aaKnown RBP6.16□□□□□ -1.42
VRK1-203ENST00000555067 FAM118BQ9BPY3 351 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 CIPCQ9C0C6 399 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 PDGFCQ9NRA1 345 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 ELOVL5Q9NYP7 299 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 TFCP2L1Q9NZI6 479 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 STAP2Q9UGK3 403 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 PAXBP1Q9Y5B6 917 aa6.16□□□□□ -1.42
VRK1-203ENST00000555067 EPB41L2O43491 1005 aaKnown RBP6.15□□□□□ -1.42
VRK1-203ENST00000555067 CYP2A6P11509 494 aaPredicted RBP6.15□□□□□ -1.42
VRK1-203ENST00000555067 MYCLP12524 364 aaPredicted RBP6.15□□□□□ -1.42
VRK1-203ENST00000555067 KCNA3P22001 575 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 PRKAG1P54619 331 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 FAM193AP78312 1265 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 DDX10Q13206 875 aaKnown RBP6.15□□□□□ -1.42
VRK1-203ENST00000555067 PDCD2Q16342 344 aaPredicted RBP6.15□□□□□ -1.42
VRK1-203ENST00000555067 CYP1B1Q16678 543 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 DARS2Q6PI48 645 aaKnown RBP6.15□□□□□ -1.42
VRK1-203ENST00000555067 MAATS1Q7Z4T9 603 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 DAAM2Q86T65 1068 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 KRT73Q86Y46 540 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 SLC15A4Q8N697 577 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 OR6B3Q8NGW1 331 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 PIGOQ8TEQ8 1089 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 RIPOR3Q96MK2 946 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 FYTTD1Q96QD9 318 aaKnown RBP6.15□□□□□ -1.42
VRK1-203ENST00000555067 TMEM60Q9H2L4 133 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 ZSCAN32Q9NX65 697 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 SNX14Q9Y5W7 946 aa6.15□□□□□ -1.42
VRK1-203ENST00000555067 A0A1W2PPL8 197 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 hCG_1642624A0A1W2PR95 340 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 RASA4BC9J798 803 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 E5RJQ4 531 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 RASA4O43374 803 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 NPR1P16066 1061 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 PTMSP20962 102 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 HTR1BP28222 390 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 DDIT3P35638 169 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 IL6STP40189 918 aaPredicted RBP6.14□□□□□ -1.43
VRK1-203ENST00000555067 GRK6P43250 576 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 MAPK9P45984 424 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 E2F1Q01094 437 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 IFIT5Q13325 482 aaKnown RBP6.14□□□□□ -1.43
VRK1-203ENST00000555067 CERCAMQ5T4B2 595 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 KIAA0319LQ8IZA0 1049 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 SIRT6Q8N6T7 355 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 NGDNQ8NEJ9 315 aaKnown RBP6.14□□□□□ -1.43
VRK1-203ENST00000555067 PRSS3P2Q8NHM4 247 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 HMCESQ96FZ2 354 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 TBATAQ96M53 351 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 DPH1Q9BZG8 443 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.14□□□□□ -1.43
VRK1-203ENST00000555067 ZNF580Q9UK33 172 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms