RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 DDX1Q92499 740 aaKnown RBP12.98□□□□□ -0.33
SYNE2-214ENST00000554928 EDEM1Q92611 657 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 PIWIL1Q96J94 861 aaKnown RBP12.98□□□□□ -0.33
SYNE2-214ENST00000554928 FAM81BQ96LP2 452 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
SYNE2-214ENST00000554928 STK33Q9BYT3 514 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 MIS12Q9H081 205 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 MFSD1Q9H3U5 465 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 PIAS3Q9Y6X2 628 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 A0A1B0GTH6 734 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 STK25O00506 426 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 DCNP07585 359 aaKnown RBP12.97□□□□□ -0.33
SYNE2-214ENST00000554928 CYP11B1P15538 503 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 PFKLP17858 780 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 TARSP26639 723 aaKnown RBP12.97□□□□□ -0.33
SYNE2-214ENST00000554928 AVPR2P30518 371 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 RPL34P49207 117 aaKnown RBP12.97□□□□□ -0.33
SYNE2-214ENST00000554928 SLC8A3P57103 927 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 EFEMP1Q12805 493 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 C10orf120Q5SQS8 335 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 SIX6OS1Q8N1H7 587 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 OSCP1Q8WVF1 389 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 PCMTD1Q96MG8 357 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-214ENST00000554928 CPXM1Q96SM3 734 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 SLC4A5Q9BY07 1137 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 LTB4R2Q9NPC1 389 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 TRPV5Q9NQA5 729 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 DUS2Q9NX74 493 aaKnown RBP12.97□□□□□ -0.33
SYNE2-214ENST00000554928 PCDHGC3Q9UN70 934 aa12.97□□□□□ -0.33
SYNE2-214ENST00000554928 KANSL1LA0AUZ9 987 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 ANTXRLA6NF34 631 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 E5RJQ4 531 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 SPECC1L-ADORA2AF8WAN1 911 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 PAPSS1O43252 624 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 MED7O43513 233 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 FYNP06241 537 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 HMBSP08397 361 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 CHRNB2P17787 502 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 AOC1P19801 751 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 CTHP32929 405 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 IFNAR2P48551 515 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 PDE6CP51160 858 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 FANCCQ00597 558 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 PRKCQQ04759 706 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 PTK2Q05397 1052 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 PDCLQ13371 301 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 FZD5Q13467 585 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 RUNX3Q13761 415 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 UBXN2BQ14CS0 331 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 TAF5Q15542 800 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 GAB4Q2WGN9 574 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 CC2D1AQ6P1N0 951 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 MIB1Q86YT6 1006 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 BBS7Q8IWZ6 715 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 SUGP1Q8IWZ8 645 aaKnown RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 CCDC105Q8IYK2 499 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 CSGALNACT1Q8TDX6 532 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 EPS8L1Q8TE68 723 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 HSFY1Q96LI6 401 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 NACA2Q9H009 215 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 FBRSL1Q9HCM7 1045 aaKnown RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 THG1LQ9NWX6 298 aaKnown RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 CLIC5Q9NZA1 410 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 DLGAP2Q9P1A6 1054 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.33
SYNE2-214ENST00000554928 NOCTQ9UK39 431 aaKnown RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 NDRG2Q9UN36 371 aaKnown RBP12.96□□□□□ -0.33
SYNE2-214ENST00000554928 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
SYNE2-214ENST00000554928 KLKB1P03952 638 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 ERBB2P04626 1255 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 MMEP08473 750 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 RFX1P22670 979 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 SOX5P35711 763 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 ATP5C1P36542 298 aaKnown RBP12.95□□□□□ -0.34
SYNE2-214ENST00000554928 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 NR1I3Q14994 352 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 ITPRIPL2Q3MIP1 535 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 PTPN20Q4JDL3 420 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 C2CD6Q53TS8 623 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 E4F1Q66K89 784 aaPredicted RBP12.95□□□□□ -0.34
SYNE2-214ENST00000554928 LRSAM1Q6UWE0 723 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 TMEM110Q86TL2 294 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 SCML4Q8N228 414 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 PJA1Q8NG27 643 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 NEK11Q8NG66 645 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 OLIG1Q8TAK6 271 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 FAM3CQ92520 227 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 TSPY26PQ9H489 355 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 ECT2Q9H8V3 914 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 RBM12Q9NTZ6 932 aaKnown RBP12.95□□□□□ -0.34
SYNE2-214ENST00000554928 SFMBT1Q9UHJ3 866 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 DNMT3LQ9UJW3 386 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms