RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 IL21RQ9HBE5 538 aa14.06□□□□□ -0.16
TUBB3-207ENST00000554927 CD93Q9NPY3 652 aa14.06□□□□□ -0.16
TUBB3-207ENST00000554927 CRTAC1Q9NQ79 661 aa14.06□□□□□ -0.16
TUBB3-207ENST00000554927 KIAA1522Q9P206 1035 aaPredicted RBP14.06□□□□□ -0.16
TUBB3-207ENST00000554927 HELZP42694 1942 aaKnown RBP14.05□□□□□ -0.16
TUBB3-207ENST00000554927 A0A087X0B3 334 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 A0A1B0GTW7 788 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 GOLGA8IPA6NC78 632 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 TRABD2BA6NFA1 517 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 ZNF233A6NK53 670 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 GOLGA8JA6NMD2 632 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 TRIM24O15164 1050 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 CASP5P51878 434 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 NOP14P78316 857 aaKnown RBP14.05□□□□□ -0.16
TUBB3-207ENST00000554927 FOXD4L6Q3SYB3 417 aaPredicted RBP14.05□□□□□ -0.16
TUBB3-207ENST00000554927 CCDC157Q569K6 752 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 MDH1BQ5I0G3 518 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 GRAMD4Q6IC98 578 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 FOXD4L3Q6VB84 417 aaPredicted RBP14.05□□□□□ -0.16
TUBB3-207ENST00000554927 ETFBKMTQ8IXQ9 262 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 GALNT15Q8N3T1 639 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 PIP4K2CQ8TBX8 421 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 RHBDD1Q8TEB9 315 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 SCFD1Q8WVM8 642 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 OTUB2Q96DC9 234 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 ANKRD36BP1Q96IX9 119 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 MMS19Q96T76 1030 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 ACOX2Q99424 681 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 MTMR12Q9C0I1 747 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 GAREM1Q9H706 876 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 SPHK2Q9NRA0 654 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 DNAJC17Q9NVM6 304 aaKnown RBP14.05□□□□□ -0.16
TUBB3-207ENST00000554927 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 CACNA2D2Q9NY47 1150 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 DKK4Q9UBT3 224 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 RAD54BQ9Y620 910 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 ANAPC1Q9H1A4 1944 aa14.05□□□□□ -0.16
TUBB3-207ENST00000554927 HOXC11O43248 304 aaPredicted RBP14.04□□□□□ -0.16
TUBB3-207ENST00000554927 CER1O95813 267 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 F13A1P00488 732 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 TNNC2P02585 160 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 ATXN1LP0C7T5 689 aaKnown RBP14.04□□□□□ -0.16
TUBB3-207ENST00000554927 IRF1P10914 325 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 MATKP42679 507 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 ABCG1P45844 678 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 DPH6Q7L8W6 267 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 TMEM25Q86YD3 366 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 BBS7Q8IWZ6 715 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 SCUBE3Q8IX30 993 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 SLC39A7Q92504 469 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 PCED1BQ96HM7 432 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 HPDLQ96IR7 371 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 C8orf48Q96LL4 319 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 CDC6Q99741 560 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 CBWD1Q9BRT8 395 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 TRIM9Q9C026 710 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 NACA2Q9H009 215 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 PDE11AQ9HCR9 933 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 TM7SF3Q9NS93 570 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 SIX4Q9UIU6 781 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 HCN2Q9UL51 889 aa14.04□□□□□ -0.16
TUBB3-207ENST00000554927 URB1O60287 2271 aaKnown RBP14.04□□□□□ -0.16
TUBB3-207ENST00000554927 ASXL3Q9C0F0 2248 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 A0A087WV48 116 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 FAM149AA5PLN7 773 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
TUBB3-207ENST00000554927 POLR2DO15514 142 aaKnown RBP14.03□□□□□ -0.16
TUBB3-207ENST00000554927 COCHO43405 550 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 CILPO75339 1184 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 NCAM1P13591 858 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 CD6P30203 668 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 SNRPFP62306 86 aaKnown RBP14.03□□□□□ -0.16
TUBB3-207ENST00000554927 DUOXA2Q1HG44 320 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 FAM26FQ5R3K3 315 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 IL27RAQ6UWB1 636 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 CEP57L1Q8IYX8 460 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 ZSWIM2Q8NEG5 633 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 CXorf38Q8TB03 319 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 FBXO32Q969P5 355 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 TOE1Q96GM8 510 aaKnown RBP14.03□□□□□ -0.16
TUBB3-207ENST00000554927 MRGPRX1Q96LB2 322 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 C7orf25Q9BPX7 421 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 GPR174Q9BXC1 333 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 SNX25Q9H3E2 840 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 FNDC3AQ9Y2H6 1198 aaKnown RBP14.03□□□□□ -0.16
TUBB3-207ENST00000554927 STARD13Q9Y3M8 1113 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 CEP192Q8TEP8 1941 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 PLXNB3Q9ULL4 1909 aa14.03□□□□□ -0.16
TUBB3-207ENST00000554927 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 FLRT2O43155 660 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 YWHAQP27348 245 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 E2F4Q16254 413 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 HLA-BQ31612 363 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 HECTD3Q5T447 861 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 CNNM4Q6P4Q7 775 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 SHC4Q6S5L8 630 aa14.02□□□□□ -0.17
TUBB3-207ENST00000554927 PDCD7Q8N8D1 485 aaKnown RBP14.02□□□□□ -0.17
TUBB3-207ENST00000554927 PDZD8Q8NEN9 1154 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms