RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SPDYAQ5MJ70 313 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 CYB5D1Q6P9G0 228 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 PPP1R21Q6ZMI0 780 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 ZNF564Q8TBZ8 553 aaPredicted RBP11.67□□□□□ -0.54
SRP54-205ENST00000554803 FBXO25Q8TCJ0 367 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 HELQQ8TDG4 1101 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 ALG3Q92685 438 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 ARHGEF26Q96DR7 871 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 VCPIP1Q96JH7 1222 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
SRP54-205ENST00000554803 KLHL5Q96PQ7 755 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 PPP1R16BQ96T49 567 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
SRP54-205ENST00000554803 OSBPL6Q9BZF3 934 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 EPB41L4BQ9H329 900 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 SEPT11Q9NVA2 429 aaKnown RBP11.67□□□□□ -0.54
SRP54-205ENST00000554803 HSPBP1Q9NZL4 362 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 SENP1Q9P0U3 644 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 LGALS13Q9UHV8 139 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 NOCTQ9UK39 431 aaKnown RBP11.67□□□□□ -0.54
SRP54-205ENST00000554803 SLC12A4Q9UP95 1085 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 PPME1Q9Y570 386 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 SDK1Q7Z5N4 2213 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 MAST4O15021 2626 aa11.67□□□□□ -0.54
SRP54-205ENST00000554803 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 WDFY3Q8IZQ1 3526 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 ANKRD65E5RJM6 399 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 ANHXE9PGG2 379 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 KIF1CO43896 1103 aaKnown RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 LRP3O75074 770 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 ATP5HO75947 161 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 KLRC2P26717 231 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 NPTX2P47972 431 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 SPEM2Q0P670 501 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 CCDC15Q0P6D6 951 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 HTR4Q13639 388 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 SLC29A2Q14542 456 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 RASA2Q15283 850 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 ARHGAP44Q17R89 818 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 SKIDA1Q1XH10 827 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 ACAD10Q6JQN1 1059 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 ARHGEF18Q6ZSZ5 1173 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 ZNF598Q86UK7 904 aaKnown RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 OR2W6PQ8NHA6 318 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 PRPF31Q8WWY3 499 aaKnown RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 DDX1Q92499 740 aaKnown RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 SNF8Q96H20 258 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 IGSF21Q96ID5 467 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 TTC25Q96NG3 672 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 NT5C1BQ96P26 610 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 TRAIPQ9BWF2 469 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 EMILIN2Q9BXX0 1053 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 GOLPH3Q9H4A6 298 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 HAUS2Q9NVX0 235 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 CNOT8Q9UFF9 292 aaKnown RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 ASH1LQ9NR48 2969 aaKnown RBP11.66□□□□□ -0.54
SRP54-205ENST00000554803 ITPR1Q14643 2758 aa11.66□□□□□ -0.54
SRP54-205ENST00000554803 AKAP13Q12802 2813 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 CCDC195A0A1B0GUA6 201 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 PSTPIP1O43586 416 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 GAS2O43903 313 aaKnown RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 GPR32O75388 356 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 VTNP04004 478 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 TRIM49P0CI25 452 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 TRIM49CP0CI26 452 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 LAMP2P13473 410 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 COMTP21964 271 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 GARTP22102 1010 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 FLT3P36888 993 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 LAMTOR4Q0VGL1 99 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 STAT4Q14765 748 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 PPP1R7Q15435 360 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 LAIR1Q6GTX8 287 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 TAS1R3Q7RTX0 852 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 TRPM8Q7Z2W7 1104 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 HAUS6Q7Z4H7 955 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 RHPN2Q8IUC4 686 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 MAP4K3Q8IVH8 894 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 CCDC89Q8N998 374 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 RNF169Q8NCN4 708 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 TMEM161BQ8NDZ6 487 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 FBXL13Q8NEE6 735 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 GIMAP7Q8NHV1 300 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 BCL7CQ8WUZ0 217 aaPredicted RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 PSPC1Q8WXF1 523 aaKnown RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 RSPH1Q8WYR4 309 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 RNF25Q96BH1 459 aaPredicted RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 NTPCRQ9BSD7 190 aaKnown RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 VN1R3Q9BXE9 311 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 MAN1C1Q9NR34 630 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 RPL26L1Q9UNX3 145 aaKnown RBP11.65□□□□□ -0.54
SRP54-205ENST00000554803 SNX24Q9Y343 169 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms