RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 RUBCNQ92622 972 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 TATDN2Q93075 761 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 HEXIM2Q96MH2 286 aaKnown RBP10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 ARID3AQ99856 593 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 ADAM33Q9BZ11 813 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 LINC00597Q9H2U6 94 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CCSER2Q9H7U1 834 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 SMPD4Q9NXE4 827 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 KIAA1468Q9P260 1216 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CFAP97Q9P2B7 532 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CHORDC1Q9UHD1 332 aaPredicted RBP10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CEP250Q9BV73 2442 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 SETXQ7Z333 2677 aaKnown RBP10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 CCDC163A0A0D9SF12 145 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 ADH1CP00326 375 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 EGFP01133 1207 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 CYP17A1P05093 508 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 ACO1P21399 889 aaKnown RBP10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 OPRD1P41143 372 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 KIF11P52732 1056 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 SLC8A3P57103 927 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 ST3GAL2Q16842 350 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 GAB4Q2WGN9 574 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 ZNF394Q53GI3 561 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 KLHL10Q6JEL2 608 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 GPRIN1Q7Z2K8 1008 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 LONP2Q86WA8 852 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 ANKRD52Q8NB46 1076 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 CDK5RAP1Q96SZ6 601 aaKnown RBP10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 NACA2Q9H009 215 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 FBRSL1Q9HCM7 1045 aaKnown RBP10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 CLIC5Q9NZA1 410 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 KIAA1257Q9ULG3 409 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 SMG5Q9UPR3 1016 aaKnown RBP10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 CTNND2Q9UQB3 1225 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 USP3Q9Y6I4 520 aa10.97□□□□□ -0.65
PTCD2P1-201ENST00000554393 RALGAPA1Q6GYQ0 2036 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 BIN1O00499 593 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 CYP26A1O43174 497 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 MAP3K7O43318 606 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 RNF40O75150 1001 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 FGFR1OPO95684 399 aaKnown RBP10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 ATP5C1P36542 298 aaKnown RBP10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 ANP32AP39687 249 aaKnown RBP10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 GOLGA8FQ08AF8 430 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 GOLGA8DPQ0D2H9 430 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 DHCR24Q15392 516 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 RAB41Q5JT25 222 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 HTR3DQ70Z44 454 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 SYT13Q7L8C5 426 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 TADA2BQ86TJ2 420 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 ARHGAP18Q8N392 663 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 CAMKK1Q8N5S9 505 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 UBR7Q8N806 425 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 SECISBP2LQ93073 1101 aaKnown RBP10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 ACDQ96AP0 544 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 RMDN1Q96DB5 314 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 NT5C1BQ96P26 610 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 KLF16Q9BXK1 252 aaPredicted RBP10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 SH3BP1Q9Y3L3 701 aa10.96□□□□□ -0.65
PTCD2P1-201ENST00000554393 MYO18AQ92614 2054 aaKnown RBP10.96□□□□□ -0.66
PTCD2P1-201ENST00000554393 ACACBO00763 2458 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 FRYLO94915 3013 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 HOXC11O43248 304 aaPredicted RBP10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 PAEPP09466 180 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 CCDC192P0DO97 292 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 VDRP11473 427 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 ADH5P11766 374 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 PGFP49763 221 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 BCAT1P54687 386 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 GCNT1Q02742 428 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 PREPLQ4J6C6 727 aaPredicted RBP10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 SGO2Q562F6 1265 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 C6orf132Q5T0Z8 1188 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 NAIF1Q69YI7 327 aaPredicted RBP10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 PKN3Q6P5Z2 889 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 RHBDF2Q6PJF5 856 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 CLEC17AQ6ZS10 378 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 SCD5Q86SK9 330 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 PIGZQ86VD9 579 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 WDR5BQ86VZ2 330 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 GPR161Q8N6U8 529 aaKnown RBP10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 LMO3Q8TAP4 145 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 EZH1Q92800 747 aaPredicted RBP10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 JAKMIP2Q96AA8 810 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 NMUR1Q9HB89 426 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 C2orf42Q9NWW7 574 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 OSER1Q9NX31 292 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 HESX1Q9UBX0 185 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 DNMT3LQ9UJW3 386 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 TSPAN16Q9UKR8 245 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 RAB23Q9ULC3 237 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 SLC8A2Q9UPR5 921 aa10.95□□□□□ -0.66
PTCD2P1-201ENST00000554393 A0A0A0MRY4 1105 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 A0A1W2PQH9 124 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 O00370 1275 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms