RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RNF43Q68DV7 783 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 CLEC20AQ6ZU45 233 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 WHAMMQ8TF30 809 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 JAKMIP2Q96AA8 810 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 TWNKQ96RR1 684 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 KLF16Q9BXK1 252 aaPredicted RBP19.8■□□□□ 0.76
CPSF2-203ENST00000554290 MMRN2Q9H8L6 949 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 APOBEC3GQ9HC16 384 aaKnown RBP19.8■□□□□ 0.76
CPSF2-203ENST00000554290 TMEM8AQ9HCN3 771 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 CYLDQ9NQC7 956 aa19.8■□□□□ 0.76
CPSF2-203ENST00000554290 BCCIPQ9P287 314 aaKnown RBP eCLIP19.8■□□□□ 0.76
CPSF2-203ENST00000554290 LSM7Q9UK45 103 aaKnown RBP19.8■□□□□ 0.76
CPSF2-203ENST00000554290 EML5Q05BV3 1969 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 SPAG17Q6Q759 2223 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 KIAA1549LQ6ZVL6 1849 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 TM4SF5O14894 197 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 MAP3K13O43283 966 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 CILPO75339 1184 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 TBX18O95935 607 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 GTF2H1P32780 548 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 PGFP49763 221 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 EDRF1Q3B7T1 1238 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 KRT39Q6A163 491 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 TCEAL6Q6IPX3 200 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 GPRIN1Q7Z2K8 1008 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 CYP2U1Q7Z449 544 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 TTC39CQ8N584 583 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 OLIG1Q8TAK6 271 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 TCEAL3Q969E4 200 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 WBP2Q969T9 261 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 SPACA7Q96KW9 195 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 XPO6Q96QU8 1125 aaKnown RBP19.79■□□□□ 0.76
CPSF2-203ENST00000554290 WDR35Q9P2L0 1181 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 CIZ1Q9ULV3 898 aaPredicted RBP19.79■□□□□ 0.76
CPSF2-203ENST00000554290 MYO16Q9Y6X6 1858 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 SDK1Q7Z5N4 2213 aa19.79■□□□□ 0.76
CPSF2-203ENST00000554290 HHLA1C9JL84 531 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 CYP26A1O43174 497 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 STX10O60499 249 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 CHRM1P11229 460 aaPredicted RBP19.78■□□□□ 0.76
CPSF2-203ENST00000554290 HNRNPLP14866 589 aaKnown RBP eCLIP19.78■□□□□ 0.76
CPSF2-203ENST00000554290 BCKDHBP21953 392 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 P2RY2P41231 377 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 DHPSP49366 369 aaPredicted RBP19.78■□□□□ 0.76
CPSF2-203ENST00000554290 PSEN1P49768 467 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 C10orf76Q5T2E6 689 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 KLHDC10Q6PID8 442 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 LPCAT2Q7L5N7 544 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 TADA2BQ86TJ2 420 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 PGBD3Q8N328 593 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 ZNF513Q8N8E2 541 aaPredicted RBP19.78■□□□□ 0.76
CPSF2-203ENST00000554290 TERB1Q8NA31 727 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 FAXDC2Q96IV6 333 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 EDEM2Q9BV94 578 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 GOLPH3LQ9H4A5 285 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 DNMT3LQ9UJW3 386 aa19.78■□□□□ 0.76
CPSF2-203ENST00000554290 KHNYNO15037 678 aaKnown RBP19.77■□□□□ 0.76
CPSF2-203ENST00000554290 RARGP13631 454 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 PLA2G4AP47712 749 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 ZCWPW2Q504Y3 356 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 C10orf120Q5SQS8 335 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 GRAMD4Q6IC98 578 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 HMGB4Q8WW32 186 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 HEXIM2Q96MH2 286 aaKnown RBP19.77■□□□□ 0.76
CPSF2-203ENST00000554290 LSM14BQ9BX40 385 aaKnown RBP19.77■□□□□ 0.76
CPSF2-203ENST00000554290 BBS2Q9BXC9 721 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 DUSP16Q9BY84 665 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 DNAJC17Q9NVM6 304 aaKnown RBP19.77■□□□□ 0.76
CPSF2-203ENST00000554290 OSER1Q9NX31 292 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 NAGPAQ9UK23 515 aa19.77■□□□□ 0.76
CPSF2-203ENST00000554290 SPTBN2O15020 2390 aa19.77■□□□□ 0.75
CPSF2-203ENST00000554290 A0A1W2PQH9 124 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 TCRBV21S2A2A0A5A6 115 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 NEDD8-MDP1E9PL57 170 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 CETN3O15182 167 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 ZBTB24O43167 697 aaPredicted RBP19.76■□□□□ 0.75
CPSF2-203ENST00000554290 GREM1O60565 184 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 ADAM23O75077 832 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 EPB41P11171 864 aaKnown RBP19.76■□□□□ 0.75
CPSF2-203ENST00000554290 KIF11P52732 1056 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 MCCD1P59942 119 aaPredicted RBP19.76■□□□□ 0.75
CPSF2-203ENST00000554290 SDE2Q6IQ49 451 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 FBXL13Q8NEE6 735 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 RLN3Q8WXF3 142 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 CDK5RAP1Q96SZ6 601 aaKnown RBP19.76■□□□□ 0.75
CPSF2-203ENST00000554290 NMUR1Q9HB89 426 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 ZDHHC4Q9NPG8 344 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.76■□□□□ 0.75
CPSF2-203ENST00000554290 RMND1Q9NWS8 449 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 MARK1Q9P0L2 795 aa19.76■□□□□ 0.75
CPSF2-203ENST00000554290 CACNG3O60359 315 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 RALAP11233 206 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 TYRP14679 529 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 NTSR1P30989 418 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 MXI1P50539 228 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 ZNF394Q53GI3 561 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 SPDYCQ5MJ68 293 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 PPP1R26Q5T8A7 1209 aaPredicted RBP19.75■□□□□ 0.75
CPSF2-203ENST00000554290 DAB2IPQ5VWQ8 1189 aa19.75■□□□□ 0.75
CPSF2-203ENST00000554290 TPGS1Q6ZTW0 290 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms