RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 YARSP54577 528 aaKnown RBP7.45□□□□□ -1.22
ATXN3-224ENST00000554040 CYP4F8P98187 520 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 TRIP6Q15654 476 aaKnown RBP7.45□□□□□ -1.22
ATXN3-224ENST00000554040 HP1BP3Q5SSJ5 553 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-224ENST00000554040 NT5DC1Q5TFE4 455 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 ANO7Q6IWH7 933 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 APBB1IPQ7Z5R6 666 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-224ENST00000554040 NEK8Q86SG6 692 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 ITIH5Q86UX2 942 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 SLFN12Q8IYM2 578 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 TMEFF1Q8IYR6 380 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 CMTM8Q8IZV2 173 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 PNPLA1Q8N8W4 532 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 ATAD1Q8NBU5 361 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 MCPH1Q8NEM0 835 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 CEP76Q8TAP6 659 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 PIGOQ8TEQ8 1089 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 BRF1Q92994 677 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 CD101Q93033 1021 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 CCDC43Q96MW1 224 aaKnown RBP7.45□□□□□ -1.22
ATXN3-224ENST00000554040 FNBP1Q96RU3 617 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 GTPBP2Q9BX10 602 aaKnown RBP7.45□□□□□ -1.22
ATXN3-224ENST00000554040 CCDC113Q9H0I3 377 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 ECT2Q9H8V3 914 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 TOPORSQ9NS56 1045 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-224ENST00000554040 RAD18Q9NS91 495 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 DKK4Q9UBT3 224 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 ZMYM5Q9UJ78 669 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 PILRBQ9UKJ0 227 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 NID2Q14112 1375 aa7.45□□□□□ -1.22
ATXN3-224ENST00000554040 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 EML5Q05BV3 1969 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 THADAQ6YHU6 1953 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 A0A087WV48 116 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 OR6C75A6NL08 312 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 M0QZQ0 153 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 TMPRSS2O15393 492 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 SH3BP5O60239 455 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 SERPINF2P08697 491 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 OR4Q2P0C623 313 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 FTH1P19P0C7X4 201 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 ATP2B1P20020 1258 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 HOXD12P35452 270 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 P2RY2P41231 377 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 NAMPTP43490 491 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 YWHAHQ04917 246 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 GFPT1Q06210 699 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 PSMD2Q13200 908 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 SLC14A1Q13336 389 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 KRT32Q14532 448 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 PDGFRLQ15198 375 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 DUOXA1Q1HG43 343 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 RPS26P11Q5JNZ5 115 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 ATF7IP2Q5U623 682 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 LARP1BQ659C4 914 aaKnown RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 CC2D1AQ6P1N0 951 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 Q6ZUG5 572 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 ARMCX6Q7L4S7 300 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 ZNF605Q86T29 641 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 FAM177A1Q8N128 213 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 FBXL16Q8N461 479 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 MDGA1Q8NFP4 955 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 DEPTORQ8TB45 409 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 USP33Q8TEY7 942 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 RLN3Q8WXF3 142 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 USP13Q92995 863 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 C18orf25Q96B23 403 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 CAMK1GQ96NX5 476 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 CITED4Q96RK1 184 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 NAP1L4Q99733 375 aaKnown RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 CCDC94Q9BW85 323 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-224ENST00000554040 NIF3L1Q9GZT8 377 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 ZFYVE1Q9HBF4 777 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 FSCN3Q9NQT6 498 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 TDP1Q9NUW8 608 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 HSFX1Q9UBD0 423 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 CCL26Q9Y258 94 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 TNFSF13BQ9Y275 285 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 RAI2Q9Y5P3 530 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 KNL1Q8NG31 2342 aa7.44□□□□□ -1.22
ATXN3-224ENST00000554040 MTMR11A4FU01 709 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 SOAT2O75908 522 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 ALDH1A2O94788 518 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 CFIP05156 583 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 CPA1P15085 419 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 AVPR1AP37288 418 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 TUFMP49411 452 aaKnown RBP7.43□□□□□ -1.22
ATXN3-224ENST00000554040 OSTNP61366 133 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 CCT2P78371 535 aaKnown RBP7.43□□□□□ -1.22
ATXN3-224ENST00000554040 SSRP1Q08945 709 aaKnown RBP7.43□□□□□ -1.22
ATXN3-224ENST00000554040 BFSP1Q12934 665 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 MYBPC2Q14324 1141 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 CRY1Q16526 586 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 LYSMD4Q5XG99 296 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 OGFOD3Q6PK18 319 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 TOGARAM2Q6ZUX3 1019 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 MINDY1Q8N5J2 469 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 FRMD1Q8N878 549 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 LSM14AQ8ND56 463 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms