RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CTC1Q2NKJ3 1217 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 ANKRD20A2Q5SQ80 823 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 ANKRD20A1Q5TYW2 823 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 ANKRD20A3Q5VUR7 823 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 OLFML1Q6UWY5 402 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 INPP5DQ92835 1189 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 DCPSQ96C86 337 aaKnown RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 SRPK1Q96SB4 655 aaKnown RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 LBHD1Q9BQE6 289 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 NFKBIZQ9BYH8 718 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 IQCGQ9H095 443 aaKnown RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 GBA2Q9HCG7 927 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 PAK5Q9P286 719 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 RASSF2P50749 326 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 NEK3P51956 506 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ZBTB16Q05516 673 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ARHGAP1Q07960 439 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 TMEM62Q0P6H9 643 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 SH2D5Q6ZV89 423 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ARMCX2Q7L311 632 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 CAND1Q86VP6 1230 aaKnown RBP15.13■□□□□ 0.01
ACTN1-211ENST00000553882 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 CLEC4CQ8WTT0 213 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 AFG1LQ8WV93 481 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 TTLL3Q9Y4R7 772 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 MAD1L1Q9Y6D9 718 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 OTOFQ9HC10 1997 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 MYO18AQ92614 2054 aaKnown RBP15.13■□□□□ 0.01
ACTN1-211ENST00000553882 COPEO14579 308 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 IREB2P48200 963 aaKnown RBP15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ARFIP2P53365 341 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 GLRA4Q5JXX5 417 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 TTC7BQ86TV6 843 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 SLC26A11Q86WA9 606 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 TTC8Q8TAM2 541 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 MIPEPQ99797 713 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 TMEM120AQ9BXJ8 343 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 KLC2Q9H0B6 622 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 PLAC1Q9HBJ0 212 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 POPDC2Q9HBU9 364 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ETNK2Q9NVF9 386 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ITGA11Q9UKX5 1188 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 HES2Q9Y543 173 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 CITO14578 2027 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-211ENST00000553882 CCDC195A0A1B0GUA6 201 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 PAPSS1O43252 624 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-211ENST00000553882 TSPAN1O60635 241 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 PEX11AO75192 247 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 DHRS4L1P0CG22 281 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 OSBPP22059 807 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 SERPINB4P48594 390 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 GBE1Q04446 702 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 FAM187BQ17R55 369 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 RPAINQ86UA6 219 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ERO1BQ86YB8 467 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 NUDCD1Q96RS6 583 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 SMYD2Q9NRG4 433 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 ARL8BQ9NVJ2 186 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 NME7Q9Y5B8 376 aa15.13■□□□□ 0.01
ACTN1-211ENST00000553882 GABBR2O75899 941 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 C1QAP02745 245 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 CYP2C8P10632 490 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 GRIA1P42261 906 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 HDAC4P56524 1084 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 SLC18A2Q05940 514 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 BOLA3Q53S33 107 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 ZNF484Q5JVG2 852 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 TRMT10BQ6PF06 316 aaKnown RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 MPP5Q8N3R9 675 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 NETO2Q8NC67 525 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 KHSRPQ92945 711 aaKnown RBP eCLIP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 DENND2DQ9H6A0 471 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 RNPEPL1Q9HAU8 725 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 KCNK13Q9HB14 408 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 FAM237BA0A1B0GVD1 139 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 EIF4E1BA6NMX2 242 aaKnown RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 CYB561D2O14569 222 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 HAUS5O94927 633 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 METTL18O95568 372 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 TOP3BO95985 862 aaKnown RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 CHRM1P11229 460 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 TSHRP16473 764 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 PTPN4P29074 926 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 PDK2Q15119 407 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 PRKD1Q15139 912 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 SMAD1Q15797 465 aaKnown RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 KIZQ2M2Z5 673 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 TTC39BQ5VTQ0 682 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 RFWD3Q6PCD5 774 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 ARMC2Q8NEN0 867 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 FAXDC2Q96IV6 333 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 ZMAT2Q96NC0 199 aaKnown RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 DPEP3Q9H4B8 488 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 DHX35Q9H5Z1 703 aaKnown RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 ZNF395Q9H8N7 513 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-211ENST00000553882 ARMCX1Q9P291 453 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 C2CD2Q9Y426 696 aa15.12■□□□□ 0.01
ACTN1-211ENST00000553882 DLDP09622 509 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms