RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 RAB41Q5JT25 222 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 ZNF658Q5TYW1 1059 aaPredicted RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 ISM2Q6H9L7 571 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 TCEAL6Q6IPX3 200 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 Q6ZNB5 142 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 TOGARAM2Q6ZUX3 1019 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 CEP68Q76N32 757 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 TTC30AQ86WT1 665 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 ZNF276Q8N554 614 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 TXNDC5Q8NBS9 432 aaKnown RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 MDGA1Q8NFP4 955 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 LMO3Q8TAP4 145 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 TCEAL3Q969E4 200 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 LOXL4Q96JB6 756 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 ACOX2Q99424 681 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 TPSD1Q9BZJ3 242 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 SPHK2Q9NRA0 654 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 CISHQ9NSE2 258 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 TBC1D14Q9P2M4 693 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 MBD1Q9UIS9 605 aaPredicted RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 FBXO10Q9UK96 956 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 RAB23Q9ULC3 237 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 PRRT4C9JH25 899 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 SLC9A3R1O14745 358 aaPredicted RBP11.13□□□□□ -0.63
DDX23-217ENST00000553065 CALCAP01258 141 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 FAM200BP0CF97 657 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 IRF1P10914 325 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 ADH5P11766 374 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 RARGP13631 454 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 P4HA1P13674 534 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 RPL13P26373 211 aaKnown RBP11.13□□□□□ -0.63
DDX23-217ENST00000553065 GRIA2P42262 883 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 TNFRSF4P43489 277 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 GAD2Q05329 585 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 ARHGAP17Q68EM7 881 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 CCDC186Q7Z3E2 898 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.13□□□□□ -0.63
DDX23-217ENST00000553065 FBXL13Q8NEE6 735 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 RLN3Q8WXF3 142 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 SECISBP2LQ93073 1101 aaKnown RBP11.13□□□□□ -0.63
DDX23-217ENST00000553065 SLC35C1Q96A29 364 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 OTUB2Q96DC9 234 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 TMEM176AQ96HP8 235 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 HEXIM2Q96MH2 286 aaKnown RBP11.13□□□□□ -0.63
DDX23-217ENST00000553065 RTKNQ9BST9 563 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 FBXO44Q9H4M3 255 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 ARHGEF4Q9NR80 690 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 CLEC4EQ9ULY5 219 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 STARD13Q9Y3M8 1113 aa11.13□□□□□ -0.63
DDX23-217ENST00000553065 ASPMQ8IZT6 3477 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 ZFHX4Q86UP3 3567 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 A0A1W2PQF6 199 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 BCLAF3A2AJT9 711 aaKnown RBP11.12□□□□□ -0.63
DDX23-217ENST00000553065 PATE3B3GLJ2 98 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 WASH3PC4AMC7 463 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 CETN3O15182 167 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 STC2O76061 302 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 KIF20AO95235 890 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 KLF8O95600 359 aaPredicted RBP11.12□□□□□ -0.63
DDX23-217ENST00000553065 CCDC192P0DO97 292 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 KRT13P13646 458 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 ATP5C1P36542 298 aaKnown RBP11.12□□□□□ -0.63
DDX23-217ENST00000553065 DGKEP52429 567 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 KDSRQ06136 332 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 MAP7D1Q3KQU3 841 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 PKDCCQ504Y2 493 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 ANO7Q6IWH7 933 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 KLHDC10Q6PID8 442 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 PIGZQ86VD9 579 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 DDX42Q86XP3 938 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDX23-217ENST00000553065 NETO1Q8TDF5 533 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 TFAP2BQ92481 460 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 KAT5Q92993 513 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 FAXDC2Q96IV6 333 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 CNOT6LQ96LI5 555 aaKnown RBP11.12□□□□□ -0.63
DDX23-217ENST00000553065 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 GSDMAQ96QA5 445 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 MED15Q96RN5 788 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 UBXN6Q9BZV1 441 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 PNPLA8Q9NP80 782 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 TLR8Q9NR97 1041 aaKnown RBP11.12□□□□□ -0.63
DDX23-217ENST00000553065 TMEM74BQ9NUR3 256 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 MARK1Q9P0L2 795 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 MAN1B1Q9UKM7 699 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 SH3BP1Q9Y3L3 701 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 TPRP12270 2363 aaKnown RBP11.12□□□□□ -0.63
DDX23-217ENST00000553065 MYH10P35580 1976 aa11.12□□□□□ -0.63
DDX23-217ENST00000553065 ATP8B3O60423 1300 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 GFRA2O00451 464 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 ADH1CP00326 375 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 APODP05090 189 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 P2RY2P41231 377 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 PLA2G4AP47712 749 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 MXI1P50539 228 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 LIMK1P53667 647 aa11.11□□□□□ -0.63
DDX23-217ENST00000553065 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
DDX23-217ENST00000553065 PDE4CQ08493 712 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms