RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 STIP1P31948 543 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 PGM5Q15124 567 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 N4BP2L1Q5TBK1 243 aaPredicted RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 RBM44Q6ZP01 1051 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 BBS12Q6ZW61 710 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 PRPF18Q99633 342 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 NIF3L1Q9GZT8 377 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 JPH1Q9HDC5 661 aaPredicted RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 PAK5Q9P286 719 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 DOT1LQ8TEK3 1739 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 C10orf71Q711Q0 1435 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 F8W8V4 182 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 ZNF862O60290 1169 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 PMLP29590 882 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 CCND2P30279 289 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 TNFSF9P41273 254 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 NUDT2P50583 147 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 YWHAEP62258 255 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 ZNF667Q5HYK9 610 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 CCNYQ8ND76 341 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 RSAD1Q9HA92 442 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 PREBQ9HCU5 417 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 SSU72Q9NP77 194 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 ACSS2Q9NR19 701 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 XPO1O14980 1071 aaKnown RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 ASNSP08243 561 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 SLC1A6P48664 564 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 LRRC38Q5VT99 294 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 PDPK2PQ6A1A2 396 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 TRMT10BQ6PF06 316 aaKnown RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 CHSY1Q86X52 802 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 NAT14Q8WUY8 206 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 CMTM5Q96DZ9 223 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 TSNARE1Q96NA8 513 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 PNPOQ9NVS9 261 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 HBS1LQ9Y450 684 aaKnown RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 SPATA31A6Q5VVP1 1343 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 CCDC78A2IDD5 438 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 MED7O43513 233 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 SPAG6O75602 509 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 CAP2P40123 477 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 ITGA9Q13797 1035 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 C15orf59Q2T9L4 293 aaPredicted RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 DACT2Q5SW24 774 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 DRICH1Q6PGQ1 229 aaPredicted RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 SHKBP1Q8TBC3 707 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 PIWIL2Q8TC59 973 aaKnown RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 TFAP2BQ92481 460 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 USP13Q92995 863 aaPredicted RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 NLRP4Q96MN2 994 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 CGRRF1Q99675 332 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 THAP1Q9NVV9 213 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 IL1RAPL1Q9NZN1 696 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 POLIQ9UNA4 740 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 UBIAD1Q9Y5Z9 338 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 APOC4-APOC2K7ER74 178 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 RGL2O15211 777 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 PMM2O15305 246 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 PEX1O43933 1283 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 APOC2P02655 101 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 UQCRBP14927 111 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 MRPS22P82650 360 aaKnown RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 FOLH1Q04609 750 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 ART3Q13508 389 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 CES3Q6UWW8 571 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 NETO2Q8NC67 525 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 PPWD1Q96BP3 646 aaKnown RBP12□□□□□ -0.49
PPFIA2-227ENST00000552948 ANKRD36BP1Q96IX9 119 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 SCYL1Q96KG9 808 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 ST6GALNAC4Q9H4F1 302 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 INPP5FQ9Y2H2 1132 aa12□□□□□ -0.49
PPFIA2-227ENST00000552948 ACO1P21399 889 aaKnown RBP11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 ABCG1P45844 678 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 RARS2Q5T160 578 aaKnown RBP11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 CCDC60Q8IWA6 550 aaPredicted RBP11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 CEP41Q9BYV8 373 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 CHCHD3Q9NX63 227 aaKnown RBP11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 ZNF541Q9H0D2 1346 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 CHN2P52757 468 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 ACTR2P61160 394 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 ACAP1Q15027 740 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 EML3Q32P44 896 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 C7orf31Q8N865 590 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 DRAXINQ8NBI3 349 aaPredicted RBP11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 RNPEPQ9H4A4 650 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 SLC17A6Q9P2U8 582 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 C15orf38-AP3S2A0A0A6YYH1 394 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 SIGLEC16A6NMB1 481 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 APOL1O14791 398 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 SERPINA6P08185 405 aa11.99□□□□□ -0.49
PPFIA2-227ENST00000552948 NELFEP18615 380 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms