RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 TNIP3Q96KP6 325 aa16.36■□□□□ 0.21
BRF1-220ENST00000552127 UBL7Q96S82 380 aaPredicted RBP16.36■□□□□ 0.21
BRF1-220ENST00000552127 P2RY13Q9BPV8 354 aa16.36■□□□□ 0.21
BRF1-220ENST00000552127 TTLL2Q9BWV7 592 aa16.36■□□□□ 0.21
BRF1-220ENST00000552127 GTPBP2Q9BX10 602 aaKnown RBP16.36■□□□□ 0.21
BRF1-220ENST00000552127 IMPG2Q9BZV3 1241 aa16.36■□□□□ 0.21
BRF1-220ENST00000552127 TDP1Q9NUW8 608 aa16.36■□□□□ 0.21
BRF1-220ENST00000552127 TMEM30AQ9NV96 361 aa16.36■□□□□ 0.21
BRF1-220ENST00000552127 EHD2Q9NZN4 543 aa16.36■□□□□ 0.21
BRF1-220ENST00000552127 HOOK1Q9UJC3 728 aaKnown RBP16.36■□□□□ 0.21
BRF1-220ENST00000552127 PTPRBP23467 1997 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 CLDN5O00501 218 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 TNFRSF10BO14763 440 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 CKMP06732 381 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 USP17L7P0C7H9 530 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 PRCPP42785 496 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 PTGER3P43115 390 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 ASPAP45381 313 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 ATXN3P54252 364 aaPredicted RBP16.35■□□□□ 0.21
BRF1-220ENST00000552127 USP46P62068 366 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 PPP3CAQ08209 521 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 FAM35AQ86V20 835 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 RASSF3Q86WH2 238 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 PNPLA1Q8N8W4 532 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 SPATA20Q8TB22 786 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 SLC39A7Q92504 469 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
BRF1-220ENST00000552127 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
BRF1-220ENST00000552127 CIZ1Q9ULV3 898 aaPredicted RBP16.35■□□□□ 0.21
BRF1-220ENST00000552127 PCDHA5Q9Y5H7 936 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
BRF1-220ENST00000552127 ZNF462Q96JM2 2506 aa16.35■□□□□ 0.21
BRF1-220ENST00000552127 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 C2orf78A6NCI8 922 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 CETN3O15182 167 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 OPHN1O60890 802 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 EPB41P11171 864 aaKnown RBP16.34■□□□□ 0.21
BRF1-220ENST00000552127 ARSAP15289 507 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 MCCD1P59942 119 aaPredicted RBP16.34■□□□□ 0.21
BRF1-220ENST00000552127 USP4Q13107 963 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 HNRNPDQ14103 355 aaKnown RBP16.34■□□□□ 0.21
BRF1-220ENST00000552127 TRIP6Q15654 476 aaKnown RBP16.34■□□□□ 0.21
BRF1-220ENST00000552127 LPCAT2Q7L5N7 544 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 TMEFF1Q8IYR6 380 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 MDGA1Q8NFP4 955 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 RIN3Q8TB24 985 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 CAMK1GQ96NX5 476 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 SLC22A12Q96S37 553 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 TSG101Q99816 390 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 MED10Q9BTT4 135 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
BRF1-220ENST00000552127 MMRN2Q9H8L6 949 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 TMEM8AQ9HCN3 771 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 HMGXB4Q9UGU5 601 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 RAI2Q9Y5P3 530 aa16.34■□□□□ 0.21
BRF1-220ENST00000552127 TK2O00142 265 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 CFIP05156 583 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 FTH1P19P0C7X4 201 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 CD59P13987 128 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 PFKLP17858 780 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 GTF2H1P32780 548 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 GJA4P35212 333 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 PDE6CP51160 858 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 NDST1P52848 882 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 ORC1Q13415 861 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 MTF1Q14872 753 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 ZNF77Q15935 545 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.2
BRF1-220ENST00000552127 ZNF605Q86T29 641 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 ACOT1Q86TX2 421 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 UNC93AQ86WB7 457 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 ZC3H3Q8IXZ2 948 aaKnown RBP16.33■□□□□ 0.2
BRF1-220ENST00000552127 ARL14EPQ8N8R7 260 aaPredicted RBP16.33■□□□□ 0.2
BRF1-220ENST00000552127 RLN3Q8WXF3 142 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 EEF2KMTQ96G04 330 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 CYP2S1Q96SQ9 504 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 NIF3L1Q9GZT8 377 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 APOBEC3GQ9HC16 384 aaKnown RBP16.33■□□□□ 0.2
BRF1-220ENST00000552127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.33■□□□□ 0.26e-7■■■■■ 135.4
BRF1-220ENST00000552127 KRT82Q9NSB4 513 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 PCDH15Q96QU1 1955 aa16.33■□□□□ 0.2
BRF1-220ENST00000552127 SLC16A3O15427 465 aaKnown RBP16.32■□□□□ 0.2
BRF1-220ENST00000552127 STX10O60499 249 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 CCDC130P13994 396 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 PPP3CCP48454 512 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 MXI1P50539 228 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 LRRC63Q05C16 580 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 INCA1Q0VD86 236 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 KRT39Q6A163 491 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 PAQR9Q6ZVX9 377 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
BRF1-220ENST00000552127 FUKQ8N0W3 1084 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 FRMD1Q8N878 549 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 CCDC150Q8NCX0 1101 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 OR2I1PQ8NGU4 316 aa16.32■□□□□ 0.2
BRF1-220ENST00000552127 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms