RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 TLR5O60602 858 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 F13A1P00488 732 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 ADORA2BP29275 332 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 MAPK8P45983 427 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 ZACNQ401N2 412 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 KMT5BQ4FZB7 885 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 HSF5Q4G112 596 aaPredicted RBP18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 C10orf76Q5T2E6 689 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 EGFLAMQ63HQ2 1017 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 SV2AQ7L0J3 742 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 CRYBG2Q8N1P7 616 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 JAKMIP2Q96AA8 810 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 OTUB2Q96DC9 234 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 PAGE5Q96GU1 130 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 TNIP3Q96KP6 325 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 NMUR1Q9HB89 426 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 CSNK1G1Q9HCP0 422 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 FAM13BQ9NYF5 915 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 DEC1Q9P2X7 70 aa18.93■□□□□ 0.62
PRPF40B-215ENST00000551418 AKAP13Q12802 2813 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 A0A1W2PQF6 199 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 HHLA1C9JL84 531 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 MDM4O15151 490 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 ASPAP45381 313 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 TUBP50607 506 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 DNM1Q05193 864 aaKnown RBP18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 BTBD8Q5XKL5 378 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 KIAA1211LQ6NV74 962 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 TPGS1Q6ZTW0 290 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 TOGARAM2Q6ZUX3 1019 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 HTR3DQ70Z44 454 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 SLC9A9Q8IVB4 645 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 TERB1Q8NA31 727 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 SNX21Q969T3 373 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 NACA2Q9H009 215 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 CD248Q9HCU0 757 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 CD93Q9NPY3 652 aa18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 EVLQ9UI08 416 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-215ENST00000551418 PRRT4C9JH25 899 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 CYP26A1O43174 497 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 NR3C1P04150 777 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 PROS1P07225 676 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 SLFN14P0C7P3 912 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 ENGP17813 658 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 AP3M2P53677 418 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 SGSM1Q2NKQ1 1148 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 SYT12Q8IV01 421 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 SPRYD3Q8NCJ5 442 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 SPACA7Q96KW9 195 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 TMEM121BQ9BXQ6 578 aaPredicted RBP18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 SLC6A17Q9H1V8 727 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 APOBEC3GQ9HC16 384 aaKnown RBP18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 DNAJC17Q9NVM6 304 aaKnown RBP18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 COMMD8Q9NX08 183 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 CALCOCO1Q9P1Z2 691 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 PILRBQ9UKJ0 227 aa18.91■□□□□ 0.62
PRPF40B-215ENST00000551418 IGF2RP11717 2491 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 NEDD8-MDP1E9PL57 170 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 ASS1P00966 412 aaKnown RBP18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 HLA-DRAP01903 254 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 CEACAM1P13688 526 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 HOXB2P14652 356 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 CSRP1P21291 193 aaKnown RBP18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 LYSMD4Q5XG99 296 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 CEP135Q66GS9 1140 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 CLEC20AQ6ZU45 233 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 HSCBQ8IWL3 235 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 CEP57L1Q8IYX8 460 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 OR2I1PQ8NGU4 316 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 GOLGA5Q8TBA6 731 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 BHMTQ93088 406 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 DUSP9Q99956 384 aaKnown RBP18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 EXOC1Q9NV70 894 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 RCOR1Q9UKL0 485 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 RAD54BQ9Y620 910 aa18.9■□□□□ 0.62
PRPF40B-215ENST00000551418 A0A1B0GVL5 298 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 A0A1W2PQH9 124 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 WASH3PC4AMC7 463 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 CISD3P0C7P0 127 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 TYRP14679 529 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 NTSR1P30989 418 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 RPL6Q02878 288 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 GRAMD4Q6IC98 578 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 SLC23A3Q6PIS1 610 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 UNQ6494/PRO21346Q6UXR6 183 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 SCD5Q86SK9 330 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 SLC41A1Q8IVJ1 513 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 TMC2Q8TDI7 906 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 BBS2Q9BXC9 721 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 NUSAP1Q9BXS6 441 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 CYLDQ9NQC7 956 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 TLR8Q9NR97 1041 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 PLK2Q9NYY3 685 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 SCML2Q9UQR0 700 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 STARD13Q9Y3M8 1113 aa18.89■□□□□ 0.61
PRPF40B-215ENST00000551418 PCDH15Q96QU1 1955 aa18.88■□□□□ 0.61
PRPF40B-215ENST00000551418 IGHV1OR15-9A0A0B4J2B8 117 aa18.88■□□□□ 0.61
PRPF40B-215ENST00000551418 SPAARA0A1B0GVQ0 90 aa18.88■□□□□ 0.61
PRPF40B-215ENST00000551418 PDXKO00764 312 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms