RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MMRN2Q9H8L6 949 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 VPS45Q9NRW7 570 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 CISHQ9NSE2 258 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 CLIC5Q9NZA1 410 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 HMGXB4Q9UGU5 601 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 ARMCX3Q9UH62 379 aaPredicted RBP11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 KIAA1257Q9ULG3 409 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 COQ4Q9Y3A0 265 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 DENND4CQ5VZ89 1909 aa11.47□□□□□ -0.57
VTI1BP3-201ENST00000550220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 HHLA1C9JL84 531 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 RARGP13631 454 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 CHKAP35790 457 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 DPP6P42658 865 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 SLC6A11P48066 632 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 SEC13P55735 322 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 COG7P83436 770 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 PNOCQ13519 176 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 ANO4Q32M45 955 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 TCERG1LQ5VWI1 586 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 ARHGAP17Q68EM7 881 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 BBS7Q8IWZ6 715 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 ANKRD52Q8NB46 1076 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 ENGASEQ8NFI3 743 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 DCLK3Q9C098 648 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 NAGPAQ9UK23 515 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 STARD13Q9Y3M8 1113 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 USP3Q9Y6I4 520 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 WDR87Q6ZQQ6 2873 aa11.46□□□□□ -0.57
VTI1BP3-201ENST00000550220 ZNF638Q14966 1978 aaKnown RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 KIF26AQ9ULI4 1882 aaPredicted RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 PMM2O15305 246 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 TULP3O75386 442 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 TBXAS1P24557 533 aaPredicted RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 GBP1P32455 592 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 KIR2DL1P43626 348 aaPredicted RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 AASDHQ4L235 1098 aaPredicted RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 DCAF17Q5H9S7 520 aaPredicted RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 SPDYCQ5MJ68 293 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 C10orf120Q5SQS8 335 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 PPP1R26Q5T8A7 1209 aaPredicted RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 ANKRD40Q6AI12 368 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 IL31Q6EBC2 164 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 SDE2Q6IQ49 451 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 FOXR2Q6PJQ5 311 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 ETFBKMTQ8IXQ9 262 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 CCDC33Q8N5R6 958 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 IL17RCQ8NAC3 791 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 TXNDC5Q8NBS9 432 aaKnown RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 SPACA7Q96KW9 195 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 DUSP15Q9H1R2 295 aaPredicted RBP11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 MARK1Q9P0L2 795 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 HESX1Q9UBX0 185 aa11.45□□□□□ -0.58
VTI1BP3-201ENST00000550220 A0A1W2PQH9 124 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 BICDL2A1A5D9 508 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 SCAMP3O14828 347 aaKnown RBP11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 CYP26A1O43174 497 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 CACNG3O60359 315 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 KLF8O95600 359 aaPredicted RBP11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 CAVIN2O95810 425 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 TBX18O95935 607 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 IRF1P10914 325 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 TIE1P35590 1138 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 MPLP40238 635 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 RAD23BP54727 409 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 CUL2Q13617 745 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 ZNF394Q53GI3 561 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 SGO2Q562F6 1265 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 ANO7Q6IWH7 933 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 GPRIN1Q7Z2K8 1008 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 TMEM25Q86YD3 366 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 ALLCQ8N6M5 410 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 ZNF513Q8N8E2 541 aaPredicted RBP11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 TERB1Q8NA31 727 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 SLC4A11Q8NBS3 891 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 JAKMIP2Q96AA8 810 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 BBS2Q9BXC9 721 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 STRIP2Q9ULQ0 834 aa11.44□□□□□ -0.58
VTI1BP3-201ENST00000550220 OBSL1O75147 1896 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 MED19A0JLT2 244 aaPredicted RBP11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 BCLAF3A2AJT9 711 aaKnown RBP11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 DCDC2BA2VCK2 349 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 NPC1O15118 1278 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 P4HA2O15460 535 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 MAP3K13O43283 966 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 GREM1O60565 184 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 GNA14O95837 355 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 TYRP14679 529 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 BCAT1P54687 386 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 CREB5Q02930 508 aa11.43□□□□□ -0.58
VTI1BP3-201ENST00000550220 KDSRQ06136 332 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms