RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LRRTM4Q86VH4 590 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 TMTC1Q8IUR5 882 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 RASGRP3Q8IV61 690 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 CPOQ8IVL8 374 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 ARHGEF19Q8IW93 802 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 SCAMP5Q8TAC9 235 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 ASB12Q8WXK4 309 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 THAP4Q8WY91 577 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 HERVK_113Q902F9 699 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 CAVIN3Q969G5 261 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 RILPL2Q969X0 211 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 DCLRE1CQ96SD1 692 aaKnown RBP4.81□□□□□ -1.64
SNRPF-202ENST00000549580 PYM1Q9BRP8 204 aaKnown RBP4.81□□□□□ -1.64
SNRPF-202ENST00000549580 TWSG1Q9GZX9 223 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 SLC25A32Q9H2D1 315 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 ALG13Q9NP73 1137 aaKnown RBP4.81□□□□□ -1.64
SNRPF-202ENST00000549580 RIC8AQ9NPQ8 531 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 AKIP1Q9NQ31 210 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 GGA3Q9NZ52 723 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 DNAJB11Q9UBS4 358 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 FEM1BQ9UK73 627 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 NDRG4Q9ULP0 352 aaKnown RBP4.81□□□□□ -1.64
SNRPF-202ENST00000549580 MRPS17Q9Y2R5 130 aaKnown RBP4.81□□□□□ -1.64
SNRPF-202ENST00000549580 AATKQ6ZMQ8 1374 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 SALL3Q9BXA9 1300 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 TISP43B9A030 160 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 CCNT2O60583 730 aaKnown RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 SRGAP2O75044 1071 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 USP1O94782 785 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 VIPP01282 170 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 CSF1RP07333 972 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 FAM163BP0C2L3 166 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 GYS1P13807 737 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 ITGALP20701 1170 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 BDNFP23560 247 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 CXCR5P32302 372 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 ALDH18A1P54886 795 aaKnown RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 GEMIN4P57678 1058 aaKnown RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 RNASE9P60153 205 aaKnown RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 HSD11B2P80365 405 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 DYRK1AQ13627 763 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 FHL3Q13643 280 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 HLXQ14774 488 aaPredicted RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 RETSATQ6NUM9 610 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 CLNKQ7Z7G1 428 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 CCDC117Q8IWD4 279 aaPredicted RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 NRSN1Q8IZ57 195 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 FAM109AQ8N4B1 249 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 MBD3L2Q8NHZ7 208 aaPredicted RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 DNAJB14Q8TBM8 379 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 RUBCNQ92622 972 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 SKA1Q96BD8 255 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 ZSWIM1Q9BR11 485 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 GBA2Q9HCG7 927 aaPredicted RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 WASH6PQ9NQA3 447 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 FBXO9Q9UK97 447 aaPredicted RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 TMEM98Q9Y2Y6 226 aa4.8□□□□□ -1.64
SNRPF-202ENST00000549580 USP15Q9Y4E8 981 aaPredicted RBP4.8□□□□□ -1.64
SNRPF-202ENST00000549580 PRAMEF33A0A0G2JMD5 474 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 HMX3A6NHT5 357 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 ADM5C9JUS6 153 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 RGS10O43665 173 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 PRAMEF10O60809 474 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 GPANK1O95872 356 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 HLA-DOAP06340 250 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 ELANEP08246 267 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 SRGAP2BP0DMP2 458 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 MAN1A1P33908 653 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 PRKAA2P54646 552 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 BCAT1P54687 386 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 MPP1Q00013 466 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 TIAL1Q01085 375 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNRPF-202ENST00000549580 TLE2Q04725 743 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 SCAPQ12770 1279 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 GPS1Q13098 491 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 G3BP1Q13283 466 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNRPF-202ENST00000549580 CUL4BQ13620 913 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 CCNIQ14094 377 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 E2F2Q14209 437 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 PDCD4Q53EL6 469 aaKnown RBP4.79□□□□□ -1.64
SNRPF-202ENST00000549580 ATPAF1Q5TC12 328 aaPredicted RBP4.79□□□□□ -1.64
SNRPF-202ENST00000549580 SFRP4Q6FHJ7 346 aaPredicted RBP4.79□□□□□ -1.64
SNRPF-202ENST00000549580 FOXR2Q6PJQ5 311 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.79□□□□□ -1.64
SNRPF-202ENST00000549580 MAPKAPK5Q8IW41 473 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 OSBPL9Q96SU4 736 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 NUDT22Q9BRQ3 303 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 UNC45AQ9H3U1 944 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 ZHX3Q9H4I2 956 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 EPS8L2Q9H6S3 715 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 VPS45Q9NRW7 570 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 IFT80Q9P2H3 777 aaPredicted RBP4.79□□□□□ -1.64
SNRPF-202ENST00000549580 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 SWAP70Q9UH65 585 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 KCNE5Q9UJ90 142 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 SLC13A4Q9UKG4 626 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 DAPP1Q9UN19 280 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms