RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 PREPLQ4J6C6 727 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 RAB41Q5JT25 222 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 BTBD8Q5XKL5 378 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 SCD5Q86SK9 330 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 WBP2Q969T9 261 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 NAGPAQ9UK23 515 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 CEP250Q9BV73 2442 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 MYOFQ9NZM1 2061 aa19.63■□□□□ 0.73
CHMP1A-207ENST00000549328 AXIN1O15169 862 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 RPP40O75818 363 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 KAT7O95251 611 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 APBB3O95704 486 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 GNA14O95837 355 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 IRF1P10914 325 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 RALAP11233 206 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 TNFRSF4P43489 277 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 UBE2HP62256 183 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 HSF5Q4G112 596 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 SGO2Q562F6 1265 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 C2orf27AQ580R0 203 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 C10orf120Q5SQS8 335 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 ERMP1Q7Z2K6 904 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 PIGZQ86VD9 579 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 TMEM25Q86YD3 366 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 ETFBKMTQ8IXQ9 262 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 ARHGAP18Q8N392 663 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 UBR7Q8N806 425 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 TRIML1Q8N9V2 468 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 RMDN1Q96DB5 314 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 ARHGEF4Q9NR80 690 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 POLR3BQ9NW08 1133 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 LSM7Q9UK45 103 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 MYO16Q9Y6X6 1858 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 DCHS1Q96JQ0 3298 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 DMXL1Q9Y485 3027 aa19.62■□□□□ 0.73
CHMP1A-207ENST00000549328 PRR5-ARHGAP8B1AHC4 643 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 BIN1O00499 593 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 VDRP11473 427 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 SDHBP21912 280 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 MARSP56192 900 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 ARHGAP8P85298 464 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 LMNB2Q03252 620 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 PAK1Q13153 545 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 CACNA2D4Q7Z3S7 1137 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 C12orf40Q86WS4 652 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 TTC30AQ86WT1 665 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 FAM160A2Q8N612 972 aaPredicted RBP19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 LOXL4Q96JB6 756 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 NT5C1BQ96P26 610 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 HHIPQ96QV1 700 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 DLL3Q9NYJ7 618 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 CHMP5Q9NZZ3 219 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 DEC1Q9P2X7 70 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 HESX1Q9UBX0 185 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 MMP17Q9ULZ9 603 aa19.61■□□□□ 0.73
CHMP1A-207ENST00000549328 KIAA1549LQ6ZVL6 1849 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 XPO1O14980 1071 aaKnown RBP19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 BCAT1P54687 386 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 SEC13P55735 322 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 COG7P83436 770 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 SPEM2Q0P670 501 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 MESP2Q0VG99 397 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 LRMPQ12912 555 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 PUM1Q14671 1186 aaKnown RBP eCLIP19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 ANO4Q32M45 955 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 PM20D1Q6GTS8 502 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 NUDT18Q6ZVK8 323 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 TRIM59Q8IWR1 403 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 PHTF2Q8N3S3 785 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 LMO3Q8TAP4 145 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 KCNV2Q8TDN2 545 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 ZC3H10Q96K80 434 aaKnown RBP19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 PARD6AQ9NPB6 346 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 WDR35Q9P2L0 1181 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 NUDT5Q9UKK9 219 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 TSPAN16Q9UKR8 245 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 USP18Q9UMW8 372 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 CTNND2Q9UQB3 1225 aa19.6■□□□□ 0.73
CHMP1A-207ENST00000549328 FOXD2O60548 495 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 TULP3O75386 442 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 PAEPP09466 180 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 CCDC192P0DO97 292 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 CHRM1P11229 460 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 CD19P15391 556 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 KIR2DL1P43626 348 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 DGKEP52429 567 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 PDE4CQ08493 712 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 BST2Q10589 180 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 CRY1Q16526 586 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 GOLGA7BQ2TAP0 167 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 Q6ZNB5 142 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 IL17RCQ8NAC3 791 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 TSTD1Q8NFU3 115 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 MARK1Q9P0L2 795 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 KIAA1468Q9P260 1216 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 ZNF510Q9Y2H8 683 aa19.59■□□□□ 0.73
CHMP1A-207ENST00000549328 SPAG17Q6Q759 2223 aa19.58■□□□□ 0.73
CHMP1A-207ENST00000549328 TBC1D3BA6NDS4 549 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 O00370 1275 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms