RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 IGHV1OR15-9A0A0B4J2B8 117 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 MDM4O15151 490 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 SPTLC2O15270 562 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 NDUFS2O75306 463 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 FAM163BP0C2L3 166 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 ADORA2BP29275 332 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 SEMA3BQ13214 749 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 GRAMD4Q6IC98 578 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 KIAA1324Q6UXG2 1013 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC36A4Q6YBV0 504 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 TOGARAM2Q6ZUX3 1019 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 TRIML1Q8N9V2 468 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 TERB1Q8NA31 727 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 LINC00301Q8NCQ3 95 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 ZMIZ2Q8NF64 920 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 IPO4Q8TEX9 1081 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 OTUB2Q96DC9 234 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 SMOQ99835 787 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 BBS2Q9BXC9 721 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 ZSCAN16Q9H4T2 348 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 DMAP1Q9NPF5 467 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 FAM49BQ9NUQ9 324 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 TMEM131Q92545 1883 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 A0A1W2PQF6 199 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 PRRT4C9JH25 899 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 POLR2DO15514 142 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 HOXC11O43248 304 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 TLR5O60602 858 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 KIF20AO95235 890 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 SERPINF2P08697 491 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 TYRP14679 529 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 NDUFV2P19404 249 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 ATICP31939 592 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 RING1Q06587 406 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 PLEKHG6Q3KR16 790 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 PREPLQ4J6C6 727 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 SHC4Q6S5L8 630 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 PIP4P1Q86T03 277 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 GRAMD1CQ8IYS0 662 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 FUKQ8N0W3 1084 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 PNPLA1Q8N8W4 532 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 C12orf29Q8N999 325 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 IQUBQ8NA54 791 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 CEP76Q8TAP6 659 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 SLC2A14Q8TDB8 520 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 OVCA2Q8WZ82 227 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 SMARCD1Q96GM5 515 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 HSPA12BQ96MM6 686 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 C7orf25Q9BPX7 421 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 CACNA2D2Q9NY47 1150 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 HMGXB4Q9UGU5 601 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 MSRB2Q9Y3D2 182 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 PCDHB9Q9Y5E1 797 aa12.64□□□□□ -0.39
TRAFD1-205ENST00000548277 ARHGAP33O14559 1287 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 SH3BP5O60239 455 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 VNN1O95497 513 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 STAU1O95793 577 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 C4BPAP04003 597 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 ATP5C1P36542 298 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 NDST1P52848 882 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 DLG4P78352 724 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 CUL4BQ13620 913 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 NCOA4Q13772 614 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 SPDYCQ5MJ68 293 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 SNX30Q5VWJ9 437 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 HTR3DQ70Z44 454 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 GPRIN1Q7Z2K8 1008 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 TNIP3Q96KP6 325 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 CAPN10Q9HC96 672 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 TLR8Q9NR97 1041 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 OSER1Q9NX31 292 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 LHX6Q9UPM6 363 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 NEUROG3Q9Y4Z2 214 aa12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-205ENST00000548277 TMEM8BA6NDV4 472 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 CUTAO60888 179 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 SYPP08247 313 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 HMBSP08397 361 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 ZDHHC11BP0C7U3 371 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 CD59P13987 128 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 ACO1P21399 889 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 RDXP35241 583 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 DPP6P42658 865 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 DGKGP49619 791 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 KNOP1Q1ED39 458 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 C19orf48Q6RUI8 117 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 LRSAM1Q6UWE0 723 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms