RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 SMTNL2Q2TAL5 461 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 MAP9Q49MG5 647 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 ERMARDQ5T6L9 678 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 TPGS2Q68CL5 300 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 PRSS55Q6UWB4 352 aaPredicted RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 MFSD7Q6UXD7 560 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 TAS1R1Q7RTX1 841 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 ADAT2Q7Z6V5 191 aaKnown RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 TTC13Q8NBP0 860 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 GRK7Q8WTQ7 553 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 TSC1Q92574 1164 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 HSPH1Q92598 858 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 MAGOHBQ96A72 148 aaKnown RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 PGAP3Q96FM1 320 aaPredicted RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 RAD9AQ99638 391 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 LRRC1Q9BTT6 524 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 PARD6BQ9BYG5 372 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 DDX47Q9H0S4 455 aaKnown RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 PRDM16Q9HAZ2 1276 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 ABCC13Q9NSE7 274 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 KLHL11Q9NVR0 708 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 FEZ2Q9UHY8 353 aaPredicted RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 RAB21Q9UL25 225 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 MAFFQ9ULX9 164 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 SCML2Q9UQR0 700 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 RWDD3Q9Y3V2 267 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 CCDC151A5D8V7 595 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 M0QYT0 321 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 HEXIM1O94992 359 aaKnown RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 NCAM1P13591 858 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 GBP1P32455 592 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 PSEN1P49768 467 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 CDH6P55285 790 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 YWHAGP61981 247 aaKnown RBP eCLIP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 DR1Q01658 176 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 ROR1Q01973 937 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 LMNB2Q03252 620 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 KLF1Q13351 362 aaPredicted RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 TFDP2Q14188 446 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 TAZQ16635 292 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 ATP13A4Q4VNC1 1196 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 BTBD8Q5XKL5 378 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 TXNRD3NBQ6F5E7 133 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 BNIPLQ7Z465 357 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 TMCO2Q7Z6W1 182 aaPredicted RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 MON1AQ86VX9 555 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 HERC6Q8IVU3 1022 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 IFT20Q8IY31 132 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 PRELID2Q8N945 189 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 ATAD1Q8NBU5 361 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 CLP1Q92989 425 aaKnown RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 PGLYRP2Q96PD5 576 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 PEBP4Q96S96 227 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 SNRNP25Q9BV90 132 aaKnown RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 VN1R3Q9BXE9 311 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 MAK16Q9BXY0 300 aaKnown RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 LRRC19Q9H756 370 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 FAM204AQ9H8W3 233 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 AFF4Q9UHB7 1163 aaKnown RBP12.9□□□□□ -0.34
RAB5B-204ENST00000548068 PCYOX1Q9UHG3 505 aa12.9□□□□□ -0.34
RAB5B-204ENST00000548068 C3orf70A6NLC5 250 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 RAD51CO43502 376 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 H2AFXP16104 143 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 TNFRSF8P28908 595 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 OR1D2P34982 312 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 COILP38432 576 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 CDR1P51861 262 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 ZNF135P52742 658 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 RABGGTBP53611 331 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 SIX1Q15475 284 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 CCNG2Q16589 344 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 ARL13BQ3SXY8 428 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 KCNT1Q5JUK3 1230 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 BSPRYQ5W0U4 402 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 DENND5BQ6ZUT9 1274 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 HFE2Q6ZVN8 426 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 SYDE1Q6ZW31 735 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 CYP4V2Q6ZWL3 525 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 BHLHA9Q7RTU4 235 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 CCDC105Q8IYK2 499 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 SLC7A14Q8TBB6 771 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 RNF139Q8WU17 664 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 NDRG1Q92597 394 aaKnown RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 NTAN1Q96AB6 310 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 SEPT5Q99719 369 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 ZNF670Q9BS34 389 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 HEMGNQ9BXL5 484 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms