RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CHST7Q9NS84 486 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 CACNG4Q9UBN1 327 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 ANAPC5Q9UJX4 755 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 TBX21Q9UL17 535 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 HPCAL4Q9UM19 191 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 ATP11BQ9Y2G3 1177 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 SNX24Q9Y343 169 aa14.01□□□□□ -0.17
PTCH1-215ENST00000547672 H3BRJ5 948 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 I3L4J1 428 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 KRT14P02533 472 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 TCF4P15884 667 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 FGFR3P22607 806 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 KCNJ1P48048 391 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 ARSEP51690 589 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 PLTPP55058 493 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 CCL23P55773 120 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 HDAC4P56524 1084 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 BCAR1P56945 870 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 MTA1Q13330 715 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 XRCC4Q13426 336 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 MRPL58Q14197 206 aaKnown RBP14□□□□□ -0.17
PTCH1-215ENST00000547672 TAF5Q15542 800 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 SMTNL2Q2TAL5 461 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 EFHC2Q5JST6 749 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 KCNT1Q5JUK3 1230 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
PTCH1-215ENST00000547672 ACBD5Q5T8D3 534 aaPredicted RBP14□□□□□ -0.17
PTCH1-215ENST00000547672 FAM171A1Q5VUB5 890 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 CRIPAKQ8N1N5 446 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 TMEM199Q8N511 208 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 ALLCQ8N6M5 410 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 SLC35B2Q8TB61 432 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 SPPL2BQ8TCT7 592 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 HASPINQ8TF76 798 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 NTAN1Q96AB6 310 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 HINFPQ9BQA5 517 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 TRIM51Q9BSJ1 452 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 TRIM31Q9BZY9 425 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 ABCC13Q9NSE7 274 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 AP4E1Q9UPM8 1137 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 PRG3Q9Y2Y8 225 aaPredicted RBP14□□□□□ -0.17
PTCH1-215ENST00000547672 RAD54BQ9Y620 910 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 USP3Q9Y6I4 520 aa14□□□□□ -0.17
PTCH1-215ENST00000547672 TTC3P53804 2025 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 ZSCAN5CA6NGD5 496 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 HHLA1C9JL84 531 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 GOLGA8KD6RF30 607 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 M0QYT0 321 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 PPFIA2O75334 1257 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 SASH3O75995 380 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 BEST1O76090 585 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 RTN3O95197 1032 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 TIMP1P01033 207 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 GALTP07902 379 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 NCAM1P13591 858 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 HTR7P34969 479 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 RPL21P46778 160 aaKnown RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 HCAR3P49019 387 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 PSEN1P49768 467 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 RPL10AP62906 217 aaKnown RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 DHX9Q08211 1270 aaKnown RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 DPYSL3Q14195 570 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 SLC39A12Q504Y0 691 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 ANKRD20A8PQ5CZ79 823 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 TXNRD3NBQ6F5E7 133 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 TRNP1Q6NT89 227 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 TRMT10CQ7L0Y3 403 aaKnown RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 MON1AQ86VX9 555 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 SCLYQ96I15 445 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 KCNK16Q96T55 309 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 TTPALQ9BTX7 342 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 SNRNP25Q9BV90 132 aaKnown RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 PPP1R12CQ9BZL4 782 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 DHX35Q9H5Z1 703 aaKnown RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 PCDH18Q9HCL0 1135 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 ZDHHC18Q9NUE0 388 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 KLHL11Q9NVR0 708 aa13.99□□□□□ -0.17
PTCH1-215ENST00000547672 R3HDM2Q9Y2K5 976 aaKnown RBP13.99□□□□□ -0.17
PTCH1-215ENST00000547672 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 HACD1B0YJ81 288 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 SGK1O00141 431 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 USP17L7P0C7H9 530 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 SLC2A3P11169 496 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 RARGP13631 454 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 L1CAMP32004 1257 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 EIF3EP60228 445 aaKnown RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 OTUD4Q01804 1114 aaKnown RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 GPR17Q13304 367 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 OASLQ15646 514 aaKnown RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 USP41Q3LFD5 358 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 SH3PXD2AQ5TCZ1 1133 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 BTBD8Q5XKL5 378 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 FUT10Q6P4F1 479 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 DARS2Q6PI48 645 aaKnown RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 DEFB128Q7Z7B8 93 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 DDX42Q86XP3 938 aaKnown RBP eCLIP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms