RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 KRT77Q7Z794 578 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 PPP1R3BQ86XI6 285 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 GATAD2AQ86YP4 633 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 SDR16C5Q8N3Y7 309 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 CYP2W1Q8TAV3 490 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 TBC1D15Q8TC07 691 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 POC1BQ8TC44 478 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 TNPO1Q92973 898 aaKnown RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 TIGD1Q96MW7 591 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 BARD1Q99728 777 aaKnown RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 STK31Q9BXU1 1019 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 MAGEB5Q9BZ81 275 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 JMJD4Q9H9V9 463 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 ETAA1Q9NY74 926 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 GGA3Q9NZ52 723 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 ZNF212Q9UDV6 495 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 ENTPD2Q9Y5L3 495 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 A0A1W2PRQ8 180 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 CCDC151A5D8V7 595 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 AREL1O15033 823 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 KIAA0391O15091 583 aaKnown RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 HOXC11O43248 304 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 TMCC2O75069 709 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 GFPT2O94808 682 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 CD1AP06126 327 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 ITGA2BP08514 1039 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 GNAI3P08754 354 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 CKMT1AP12532 417 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 PRDX5P30044 214 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 FOLR3P41439 243 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 PIK3CGP48736 1102 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 HNRNPMP52272 730 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 GNAI1P63096 354 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 MC2RQ01718 297 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 TLE2Q04725 743 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 HABP2Q14520 560 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 NBPF8Q3BBV2 869 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 WDR45BQ5MNZ6 344 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 TSTD2Q5T7W7 516 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 SULT6B1Q6IMI4 303 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 PDXDC1Q6P996 788 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 VWA1Q6PCB0 445 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 KLHL17Q6TDP4 642 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 C16orf54Q6UWD8 224 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 PPP1R32Q7Z5V6 425 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 MOGAT3Q86VF5 341 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 FTSJ3Q8IY81 847 aaKnown RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 CFAP52Q8N1V2 620 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 Q8N9P0 234 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 SPPL3Q8TCT6 385 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 HASPINQ8TF76 798 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 STYXQ8WUJ0 223 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 DDB2Q92466 427 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 SERINC2Q96SA4 455 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 TIMP4Q99727 224 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 MRPL46Q9H2W6 279 aaKnown RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 GPR35Q9HC97 309 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 SEPSECSQ9HD40 501 aaKnown RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 NECTIN3Q9NQS3 549 aa4.82□□□□□ -1.64
SCAF11-210ENST00000547654 OLA1Q9NTK5 396 aaKnown RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 SIDT1Q9NXL6 827 aaKnown RBP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCAF11-210ENST00000547654 ARAP1Q96P48 1450 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 KAT6BQ8WYB5 2073 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 KAT6AQ92794 2004 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 PRAMEF33A0A0G2JMD5 474 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 CCDC196A0A1B0GTZ2 297 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 FSD2A1L4K1 749 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 HMX3A6NHT5 357 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 VWC2LB2RUY7 222 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 BTN3A1O00481 513 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 PIP5K1BO14986 540 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 YY2O15391 372 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 PRAMEF10O60809 474 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 ZBED4O75132 1171 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 TNFRSF6BO95407 300 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 NDST3O95803 873 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 AHSGP02765 367 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 ITGA5P08648 1049 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 MTHFD1P11586 935 aaKnown RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 ATP1A3P13637 1013 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 KCNA2P16389 499 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 KLRC1P26715 233 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 ARFIP2P53365 341 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 TERF1P54274 439 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 POLE2P56282 527 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 EXOSC9Q06265 439 aaKnown RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 SF3B3Q15393 1217 aaKnown RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 FAM110CQ1W6H9 321 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 RRAGBQ5VZM2 374 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 ARL6IP4Q66PJ3 421 aaKnown RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 TANGO2Q6ICL3 276 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 UNC13DQ70J99 1090 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 BRINP3Q76B58 766 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 PEG10Q86TG7 708 aaKnown RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 PDSS2Q86YH6 399 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 MPP5Q8N3R9 675 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 FAM109AQ8N4B1 249 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms