RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 IRF2BP2Q7Z5L9 587 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 FAM35AQ86V20 835 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 NETO1Q8TDF5 533 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 C2orf15Q8WU43 125 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 ZNF606Q8WXB4 792 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 EXOC4Q96A65 974 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 PDLIM2Q96JY6 352 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 ZSWIM3Q96MP5 696 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 PANX2Q96RD6 677 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 HNRNPABQ99729 332 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 B3GNT5Q9BYG0 378 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 HAUS4Q9H6D7 363 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 KRT82Q9NSB4 513 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 SEPT11Q9NVA2 429 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 THG1LQ9NWX6 298 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 HESX1Q9UBX0 185 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 NOCTQ9UK39 431 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 TSPAN16Q9UKR8 245 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 BZW2Q9Y6E2 419 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 NUP210Q8TEM1 1887 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-226ENST00000547259 SHISA7A6NL88 538 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 MOSPD3O75425 235 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 MMEP08473 750 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 FAM200BP0CF97 657 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 TDGF1P13385 188 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 BDNFP23560 247 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 HOXA6P31267 233 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 AMPD2Q01433 879 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 CDR2Q01850 454 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 DUSP4Q13115 394 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 SIM2Q14190 667 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-226ENST00000547259 CNGA2Q16280 664 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 TAF12Q16514 161 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 MEA1Q16626 185 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 HGSNATQ68CP4 663 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 POTEHQ6S545 545 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 LCLAT1Q6UWP7 414 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 PRR23BQ6ZRT6 265 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 VPS36Q86VN1 386 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 LONP2Q86WA8 852 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 FUKQ8N0W3 1084 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 SHKBP1Q8TBC3 707 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 PSMG2Q969U7 264 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 SMARCD1Q96GM5 515 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 FUBP3Q96I24 572 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC7-226ENST00000547259 GCNAQ96QF7 691 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 AGPAT1Q99943 283 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 ZSWIM1Q9BR11 485 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 ZNF518BQ9C0D4 1074 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 ATXN3LQ9H3M9 355 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
HDAC7-226ENST00000547259 COL4A3Q01955 1670 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 A0A1W2PRU2 124 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 SOBPA7XYQ1 873 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 ARNTLO00327 626 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 AP1G2O75843 785 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-226ENST00000547259 TNFAIP3P21580 790 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 TGM1P22735 817 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 CDC25CP30307 473 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 BCAT1P54687 386 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 SLC8A3P57103 927 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 BST2Q10589 180 aaKnown RBP12.71□□□□□ -0.37
HDAC7-226ENST00000547259 MGAT5BQ3V5L5 792 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 WDR59Q6PJI9 974 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 ZNF571Q7Z3V5 609 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-226ENST00000547259 DNAJB7Q7Z6W7 309 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-226ENST00000547259 PASD1Q8IV76 773 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-226ENST00000547259 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 ATAD1Q8NBU5 361 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 UBA3Q8TBC4 463 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 SEPT5Q99719 369 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-226ENST00000547259 DEF6Q9H4E7 631 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 ARHGAP20Q9P2F6 1191 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 PCDHGC3Q9UN70 934 aa12.71□□□□□ -0.37
HDAC7-226ENST00000547259 COL4A2P08572 1712 aa12.71□□□□□ -0.38
HDAC7-226ENST00000547259 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 SLC30A4O14863 429 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 NRDCO43847 1150 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 ATG13O75143 517 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 VNN2O95498 520 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 SETSIPP0DME0 302 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 HAPLN1P10915 354 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-226ENST00000547259 GJA1P17302 382 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 CHRNB2P17787 502 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 CYP2F1P24903 491 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 ANXA13P27216 316 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
HDAC7-226ENST00000547259 GRIK1P39086 918 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 MAGEA11P43364 429 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 CDK17Q00537 523 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms