RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SEPT11Q9NVA2 429 aaKnown RBP17.64■□□□□ 0.41
LTBR-215ENST00000546296 NOCTQ9UK39 431 aaKnown RBP17.64■□□□□ 0.41
LTBR-215ENST00000546296 STRIP2Q9ULQ0 834 aa17.64■□□□□ 0.41
LTBR-215ENST00000546296 LRRC53A6NM62 1247 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 STK25O00506 426 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 MDM4O15151 490 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 LSM8O95777 96 aaKnown RBP17.63■□□□□ 0.41
LTBR-215ENST00000546296 LTFP02788 710 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 IRF1P10914 325 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 IFNAR2P48551 515 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 ZNF77Q15935 545 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 SLC44A4Q53GD3 710 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 FIGNQ5HY92 759 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 SFMBT2Q5VUG0 894 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 KLHDC10Q6PID8 442 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 BHLHA9Q7RTU4 235 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 SIX5Q8N196 739 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 ZNF276Q8N554 614 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 MSANTD4Q8NCY6 345 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 IPO4Q8TEX9 1081 aaKnown RBP17.63■□□□□ 0.41
LTBR-215ENST00000546296 FAM149B1Q96BN6 582 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 IQCDQ96DY2 449 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 CPXM1Q96SM3 734 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 ABCC13Q9NSE7 274 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 DUS2Q9NX74 493 aaKnown RBP17.63■□□□□ 0.41
LTBR-215ENST00000546296 RASAL2Q9UJF2 1139 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 SH3BP1Q9Y3L3 701 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.63■□□□□ 0.41
LTBR-215ENST00000546296 MYO10Q9HD67 2058 aa17.63■□□□□ 0.41
LTBR-215ENST00000546296 FAM170AA1A519 330 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 FAM86C2PA6NEL3 165 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 PAPSS1O43252 624 aaPredicted RBP17.62■□□□□ 0.41
LTBR-215ENST00000546296 TCF3P15923 654 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 CHRNB2P17787 502 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 ZXDBP98169 803 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 USP4Q13107 963 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 PDGFRLQ15198 375 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 NAA35Q5VZE5 725 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 OR6B2Q6IFH4 312 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 TRIM72Q6ZMU5 477 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 HFE2Q6ZVN8 426 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 ERICH1Q86X53 443 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 TTC8Q8TAM2 541 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 RIN3Q8TB24 985 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 CPA5Q8WXQ8 436 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 DNASE1L2Q92874 299 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 AGPAT1Q99943 283 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 C1QTNF1Q9BXJ1 281 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 KLF16Q9BXK1 252 aaPredicted RBP17.62■□□□□ 0.41
LTBR-215ENST00000546296 MFSD1Q9H3U5 465 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 ARHGEF3Q9NR81 526 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 OLA1Q9NTK5 396 aaKnown RBP17.62■□□□□ 0.41
LTBR-215ENST00000546296 MARCH2Q9P0N8 246 aa17.62■□□□□ 0.41
LTBR-215ENST00000546296 PATJQ8NI35 1801 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 A0A1W2PQJ5 194 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 SLC9A3R1O14745 358 aaPredicted RBP17.61■□□□□ 0.41
LTBR-215ENST00000546296 CAPN9O14815 690 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 HMBSP08397 361 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 CDH5P33151 784 aaPredicted RBP17.61■□□□□ 0.41
LTBR-215ENST00000546296 KPNA1P52294 538 aaPredicted RBP17.61■□□□□ 0.41
LTBR-215ENST00000546296 COG7P83436 770 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 FMO1Q01740 532 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 TRIM68Q6AZZ1 485 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 IRF2BP2Q7Z5L9 587 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 OSCP1Q8WVF1 389 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 PBXIP1Q96AQ6 731 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 C18orf8Q96DM3 657 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 ASIC4Q96FT7 647 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 SHDQ96IW2 340 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 ZFRQ96KR1 1074 aaKnown RBP17.61■□□□□ 0.41
LTBR-215ENST00000546296 FAM83CQ9BQN1 747 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 TRIM62Q9BVG3 475 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 TRIM5Q9C035 493 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 TTYH3Q9C0H2 523 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 NUCKS1Q9H1E3 243 aaKnown RBP17.61■□□□□ 0.41
LTBR-215ENST00000546296 EBF3Q9H4W6 596 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 TRPV5Q9NQA5 729 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 HEBP1Q9NRV9 189 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 TJP2Q9UDY2 1190 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 WNT6Q9Y6F9 365 aa17.61■□□□□ 0.41
LTBR-215ENST00000546296 ZNF638Q14966 1978 aaKnown RBP17.6■□□□□ 0.41
LTBR-215ENST00000546296 SLC12A8A0AV02 714 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 E2F8A0AVK6 867 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 SCAMP3O14828 347 aaKnown RBP17.6■□□□□ 0.41
LTBR-215ENST00000546296 ERBB2P04626 1255 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 NCAM1P13591 858 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 TNFAIP3P21580 790 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 TNK2Q07912 1038 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 MLF2Q15773 248 aaPredicted RBP17.6■□□□□ 0.41
LTBR-215ENST00000546296 ITPRIPL2Q3MIP1 535 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 PTPN20Q4JDL3 420 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 EFHC1Q5JVL4 640 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 TMEM31Q5JXX7 168 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 SPECC1LQ69YQ0 1117 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 GAS2L3Q86XJ1 694 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 ATP2A3Q93084 1043 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 LINC00597Q9H2U6 94 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 AIPL1Q9NZN9 384 aa17.6■□□□□ 0.41
LTBR-215ENST00000546296 LSM7Q9UK45 103 aaKnown RBP17.6■□□□□ 0.41
LTBR-215ENST00000546296 CAPN11Q9UMQ6 739 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms