RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 NAGPAQ9UK23 515 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 HELZP42694 1942 aaKnown RBP12.48□□□□□ -0.41
YBX3-217ENST00000546164 MIA3Q5JRA6 1907 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 BECN2A8MW95 431 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 M0QYV0 167 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 GREM1O60565 184 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 RALAP11233 206 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 RPL34P49207 117 aaKnown RBP12.47□□□□□ -0.41
YBX3-217ENST00000546164 YWHAGP61981 247 aaKnown RBP eCLIP12.47□□□□□ -0.41
YBX3-217ENST00000546164 MYL5Q02045 173 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 APBA1Q02410 837 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 TYRO3Q06418 890 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 ADIGQ0VDE8 80 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 KCNMA1Q12791 1236 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 PON2Q15165 354 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 HTR3DQ70Z44 454 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 MAML2Q8IZL2 1156 aaPredicted RBP12.47□□□□□ -0.41
YBX3-217ENST00000546164 TTC16Q8NEE8 873 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
YBX3-217ENST00000546164 EXOC4Q96A65 974 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 ULBP1Q9BZM6 244 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 FBXO4Q9UKT5 387 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 SH3BP1Q9Y3L3 701 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 MYO15AQ9UKN7 3530 aa12.47□□□□□ -0.41
YBX3-217ENST00000546164 ZFHX2Q9C0A1 2572 aaPredicted RBP12.46□□□□□ -0.41
YBX3-217ENST00000546164 DMDP11532 3685 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 LAMTOR5O43504 91 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 MED7O43513 233 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 CYP17A1P05093 508 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 ZNF18P17022 549 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 DRD1P21728 446 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 NBL1P41271 181 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 GPD2P43304 727 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 GOLGA8FQ08AF8 430 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 GOLGA8DPQ0D2H9 430 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 GRSF1Q12849 480 aaKnown RBP eCLIP12.46□□□□□ -0.41
YBX3-217ENST00000546164 MTAPQ13126 283 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 NCAPHQ15003 741 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 KRT31Q15323 416 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 DHCR24Q15392 516 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 GAB4Q2WGN9 574 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 ZNF528Q3MIS6 628 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 PMF1Q6P1K2 205 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 SIX6OS1Q8N1H7 587 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 STK32AQ8WU08 396 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 ZNF606Q8WXB4 792 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 IRGQQ8WZA9 623 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 ATOH1Q92858 354 aaPredicted RBP12.46□□□□□ -0.41
YBX3-217ENST00000546164 WBP2Q969T9 261 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 P2RY13Q9BPV8 354 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 PRMT8Q9NR22 394 aaPredicted RBP12.46□□□□□ -0.41
YBX3-217ENST00000546164 FANCLQ9NW38 375 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 SPATA6Q9NWH7 488 aaPredicted RBP12.46□□□□□ -0.41
YBX3-217ENST00000546164 TAB2Q9NYJ8 693 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 DNAJC12Q9UKB3 198 aa12.46□□□□□ -0.41
YBX3-217ENST00000546164 RIF1Q5UIP0 2472 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 MYO16Q9Y6X6 1858 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 LRRC10BA6NIK2 292 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 PROB1E7EW31 1015 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 FBXO21O94952 628 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 PAPSS2O95340 614 aaPredicted RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 ADH1CP00326 375 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 CALCAP01258 141 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 GNA15P30679 374 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 EIF2DP41214 584 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 GALK1P51570 392 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 DAOAP59103 153 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 COG7P83436 770 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 GAS6Q14393 721 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 FBXO43Q4G163 708 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 KLHDC7AQ5VTJ3 777 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 FSTL4Q6MZW2 842 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 CAVIN1Q6NZI2 390 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 RHBDF2Q6PJF5 856 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 Q6ZNB5 142 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 BBS7Q8IWZ6 715 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 SPEM1Q8N4L4 309 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 CD101Q93033 1021 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 BPIFA3Q9BQP9 254 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 NAA15Q9BXJ9 866 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 NAT10Q9H0A0 1025 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 HSD3B7Q9H2F3 369 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 PLCB1Q9NQ66 1216 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 OLA1Q9NTK5 396 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 RBM12Q9NTZ6 932 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 LIMA1Q9UHB6 759 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 LSM7Q9UK45 103 aaKnown RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 AJAP1Q9UKB5 411 aaPredicted RBP12.45□□□□□ -0.42
YBX3-217ENST00000546164 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
YBX3-217ENST00000546164 YJEFN3A6XGL0 299 aa12.44□□□□□ -0.42
YBX3-217ENST00000546164 E7ENQ6 273 aa12.44□□□□□ -0.42
YBX3-217ENST00000546164 FOXN3O00409 490 aaPredicted RBP12.44□□□□□ -0.42
YBX3-217ENST00000546164 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
YBX3-217ENST00000546164 SCAMP3O14828 347 aaKnown RBP12.44□□□□□ -0.42
YBX3-217ENST00000546164 MDM4O15151 490 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms