RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	SERPINE1	P05121	402 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SPATA31D3	P0C874	917 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	YBX3	P16989	372 aa	Known RBP eCLIP	10.53	□□□□□ -0.72	1e-13	■□□□□ 10.9
UBC-213	ENST00000546120	DNAJB1	P25685	340 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	PSMD8	P48556	350 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	PCYT1A	P49585	367 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	CYP2J2	P51589	502 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	TMBIM6	P55061	237 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	RPS3A	P61247	264 aa	Known RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	MYBPC1	Q00872	1141 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	ODR4	Q5SWX8	454 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	LPCAT4	Q643R3	524 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SNRNP48	Q6IEG0	339 aa	Known RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	C16orf87	Q6PH81	154 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SPOCD1	Q6ZMY3	1216 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SPATA31D4	Q6ZUB0	917 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	ALYREF	Q86V81	257 aa	Known RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	ADGRF4	Q8IZF3	695 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	UNC5B	Q8IZJ1	945 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	FEZF2	Q8TBJ5	459 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	ZC3H15	Q8WU90	426 aa	Known RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	RSAD2	Q8WXG1	361 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	S100Z	Q8WXG8	99 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	STARD8	Q92502	1023 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SLITRK1	Q96PX8	696 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	FERMT1	Q9BQL6	677 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	RUSC1	Q9BVN2	902 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	ANKRD60	Q9BZ19	345 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	NYX	Q9GZU5	481 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	VAT1L	Q9HCJ6	419 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	XAB2	Q9HCS7	855 aa	Known RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	GPCPD1	Q9NPB8	672 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	CYP26B1	Q9NR63	512 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	ARMCX1	Q9P291	453 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SATB2	Q9UPW6	733 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	SNX9	Q9Y5X1	595 aa		10.53	□□□□□ -0.72
UBC-213	ENST00000546120	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.53	□□□□□ -0.72
UBC-213	ENST00000546120	hCG_2014768	A0A024R1R8	64 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	PRSS51	A0A1B0GVH4	220 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	ARHGEF37	A1IGU5	675 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	DCAF8L1	A6NGE4	600 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	CAPN8	A6NHC0	703 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	USP17L5	A8MUK1	530 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	TMEM114	B3SHH9	223 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120		H3BSA7	217 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	SGK1	O00141	431 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	PFDN6	O15212	129 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	SIN3B	O75182	1162 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	TADA2A	O75478	443 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	SULT1C4	O75897	302 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	BCAS2	O75934	225 aa	Predicted RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	FBXO21	O94952	628 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	PROC	P04070	461 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	C6orf222	P0C671	652 aa	Predicted RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	DCK	P27707	260 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	NMT1	P30419	496 aa	Known RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	RFC4	P35249	363 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	MAGEA6	P43360	314 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	NUMB	P49757	651 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	ALDH18A1	P54886	795 aa	Known RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	SNX17	Q15036	470 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	CHI3L2	Q15782	390 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	HADH	Q16836	314 aa	Known RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	ABCB5	Q2M3G0	1257 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	KIAA1841	Q6NSI8	718 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	FBXL19	Q6PCT2	694 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	DCLRE1A	Q6PJP8	1040 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	GADL1	Q6ZQY3	521 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	BBS12	Q6ZW61	710 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	TTC7B	Q86TV6	843 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	CARM1	Q86X55	608 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	DNAAF5	Q86Y56	855 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	RHPN2	Q8IUC4	686 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	LRRC49	Q8IUZ0	686 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	CHERP	Q8IWX8	916 aa	Known RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	PPM1K	Q8N3J5	372 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	LZTR1	Q8N653	840 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	CNTD1	Q8N815	330 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	LEMD2	Q8NC56	503 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	MCU	Q8NE86	351 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	FBXO36	Q8NEA4	188 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	COA7	Q96BR5	231 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	HSPBAP1	Q96EW2	488 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	MAGED4	Q96JG8	741 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	DNAJC1	Q96KC8	554 aa	Known RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	GJD4	Q96KN9	370 aa	Predicted RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	RANBP9	Q96S59	729 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	VPS33B	Q9H267	617 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	DNAJC17	Q9NVM6	304 aa	Known RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	SELENON	Q9NZV5	590 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.52	□□□□□ -0.73
UBC-213	ENST00000546120	RIMS3	Q9UJD0	308 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	VAV3	Q9UKW4	847 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	DNPEP	Q9ULA0	475 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	ERGIC3	Q9Y282	383 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	SUGT1	Q9Y2Z0	365 aa		10.52	□□□□□ -0.73
UBC-213	ENST00000546120	P4HB	P07237	508 aa	Known RBP	10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms