RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ARRDC1-AS1Q9H2J1 176 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 CACNA1AO00555 2505 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.95■■□□□ 1.42
CHD4-214ENST00000545942 A0A1W2PQH9 124 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 MED19A0JLT2 244 aaPredicted RBP23.95■■□□□ 1.42
CHD4-214ENST00000545942 ANTXRLA6NF34 631 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 TNFRSF4P43489 277 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 PSEN1P49768 467 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 KDSRQ06136 332 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 PLK5Q496M5 336 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 PREPLQ4J6C6 727 aaPredicted RBP23.95■■□□□ 1.42
CHD4-214ENST00000545942 CCDC186Q7Z3E2 898 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 TMEM25Q86YD3 366 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 ETFBKMTQ8IXQ9 262 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 SLC4A11Q8NBS3 891 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 TATDN2Q93075 761 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 NMUR1Q9HB89 426 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.95■■□□□ 1.426e-8■■□□□ 11.8
CHD4-214ENST00000545942 NAGPAQ9UK23 515 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 LSM7Q9UK45 103 aaKnown RBP23.95■■□□□ 1.42
CHD4-214ENST00000545942 COQ4Q9Y3A0 265 aa23.95■■□□□ 1.42
CHD4-214ENST00000545942 TRIM49BA6NDI0 452 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 GREM1O60565 184 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 RARGP13631 454 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 TIE1P35590 1138 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 RAD23BP54727 409 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 STIM1Q13586 685 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 ELF2Q15723 593 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 ANO4Q32M45 955 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 TADA2BQ86TJ2 420 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 RASSF3Q86WH2 238 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 PHTF2Q8N3S3 785 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 ALLCQ8N6M5 410 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 NAT16Q8N8M0 369 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 IL17RCQ8NAC3 791 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 DEC1Q9P2X7 70 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 ARMCX3Q9UH62 379 aaPredicted RBP23.94■■□□□ 1.42
CHD4-214ENST00000545942 DNMT3LQ9UJW3 386 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 PCDHGA5Q9Y5G8 931 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 USP3Q9Y6I4 520 aa23.94■■□□□ 1.42
CHD4-214ENST00000545942 KIAA1549LQ6ZVL6 1849 aa23.93■■□□□ 1.42
CHD4-214ENST00000545942 PSMA7O14818 248 aa23.93■■□□□ 1.42
CHD4-214ENST00000545942 TULP3O75386 442 aa23.93■■□□□ 1.42
CHD4-214ENST00000545942 KLF8O95600 359 aaPredicted RBP23.93■■□□□ 1.42
CHD4-214ENST00000545942 KIR2DL1P43626 348 aaPredicted RBP23.93■■□□□ 1.42
CHD4-214ENST00000545942 USP39Q53GS9 565 aaKnown RBP23.93■■□□□ 1.42
CHD4-214ENST00000545942 C10orf120Q5SQS8 335 aa23.93■■□□□ 1.42
CHD4-214ENST00000545942 ANO7Q6IWH7 933 aa23.93■■□□□ 1.42
CHD4-214ENST00000545942 NUDT18Q6ZVK8 323 aa23.93■■□□□ 1.42
CHD4-214ENST00000545942 ELOA2Q8IYF1 753 aaPredicted RBP23.93■■□□□ 1.42
CHD4-214ENST00000545942 TXNDC5Q8NBS9 432 aaKnown RBP23.93■■□□□ 1.42
CHD4-214ENST00000545942 CNOT6LQ96LI5 555 aaKnown RBP23.93■■□□□ 1.42
CHD4-214ENST00000545942 DUSP15Q9H1R2 295 aaPredicted RBP23.93■■□□□ 1.42
CHD4-214ENST00000545942 NUDT5Q9UKK9 219 aa23.93■■□□□ 1.42
CHD4-214ENST00000545942 MYO16Q9Y6X6 1858 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 TBC1D3BA6NDS4 549 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 SLC30A4O14863 429 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 DCLK1O15075 740 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 RHOBTB1O94844 696 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 ZNF806P0C7X5 589 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 CHRM1P11229 460 aaPredicted RBP23.92■■□□□ 1.42
CHD4-214ENST00000545942 RALAP11233 206 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 PLA2G4AP47712 749 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 SLC8A3P57103 927 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 EOGTQ5NDL2 527 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 EMC10Q5UCC4 262 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 ARHGAP17Q68EM7 881 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 SCD5Q86SK9 330 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 ZNF276Q8N554 614 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 C12orf50Q8NA57 414 aaPredicted RBP23.92■■□□□ 1.42
CHD4-214ENST00000545942 SLC35C1Q96A29 364 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 DHTKD1Q96HY7 919 aaPredicted RBP23.92■■□□□ 1.42
CHD4-214ENST00000545942 CDK5RAP1Q96SZ6 601 aaKnown RBP23.92■■□□□ 1.42
CHD4-214ENST00000545942 TPSD1Q9BZJ3 242 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 UBXN6Q9BZV1 441 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 CLIC5Q9NZA1 410 aa23.92■■□□□ 1.42
CHD4-214ENST00000545942 SGK1O00141 431 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 MDM4O15151 490 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 GDF9O60383 454 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 ALDH1A2O94788 518 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 GBP1P32455 592 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 PPP1R2P41236 205 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 CUL2Q13617 745 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 CCDC6Q16204 474 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 TMEM92Q6UXU6 159 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 C11orf74Q86VG3 221 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 TERB1Q8NA31 727 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 ANKRD52Q8NB46 1076 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 MDGA1Q8NFP4 955 aa23.91■■□□□ 1.42
CHD4-214ENST00000545942 METTL14Q9HCE5 456 aaKnown RBP23.91■■□□□ 1.42
CHD4-214ENST00000545942 MYH10P35580 1976 aa23.9■■□□□ 1.42
CHD4-214ENST00000545942 DCDC2BA2VCK2 349 aa23.9■■□□□ 1.42
CHD4-214ENST00000545942 NEDD8-MDP1E9PL57 170 aa23.9■■□□□ 1.42
CHD4-214ENST00000545942 MPLP40238 635 aa23.9■■□□□ 1.42
CHD4-214ENST00000545942 YWHAEP62258 255 aaKnown RBP23.9■■□□□ 1.42
CHD4-214ENST00000545942 AASDHQ4L235 1098 aaPredicted RBP23.9■■□□□ 1.42
CHD4-214ENST00000545942 PLA2G2CQ5R387 149 aa23.9■■□□□ 1.42
CHD4-214ENST00000545942 ISM2Q6H9L7 571 aa23.9■■□□□ 1.42
CHD4-214ENST00000545942 PIGZQ86VD9 579 aa23.9■■□□□ 1.42
CHD4-214ENST00000545942 TTC30AQ86WT1 665 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms