RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 THAP2Q9H0W7 228 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 TLR8Q9NR97 1041 aaKnown RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 NAALADL1Q9UQQ1 740 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 C2CD4DB7Z1M9 353 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 ZNF197O14709 1029 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 AKR1B10O60218 316 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 TLR5O60602 858 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 RARGP13631 454 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 TFE3P19532 575 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 ABCB4P21439 1286 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 FCARP24071 287 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 FLT3P36888 993 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 GSCP56915 257 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 CCZ1BP86790 482 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 CCZ1P86791 482 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 SLC26A9Q7LBE3 791 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 LRRC8AQ8IWT6 810 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 EMC1Q8N766 993 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 PDZD8Q8NEN9 1154 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 IRGQQ8WZA9 623 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 WBP2Q969T9 261 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 FAM149B1Q96BN6 582 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 LRRC3BQ96PB8 259 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 TRIM7Q9C029 511 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 DEF6Q9H4E7 631 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 EHD2Q9NZN4 543 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 TMEM59LQ9UK28 342 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 A0A0U1RQJ8 604 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 GALCP54803 685 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 GSDMDP57764 484 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 RAB6CQ53S08 254 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 FAM78AQ5JUQ0 283 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 PPP1R15BQ5SWA1 713 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 FAM102AQ5T9C2 384 aaPredicted RBP17.06■□□□□ 0.32
LIMS2-217ENST00000545738 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
LIMS2-217ENST00000545738 RAB6CQ9H0N0 254 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 TASP1Q9H6P5 420 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 METTL5Q9NRN9 209 aaKnown RBP17.06■□□□□ 0.32
LIMS2-217ENST00000545738 CLIC5Q9NZA1 410 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 CDH7Q9ULB5 785 aa17.06■□□□□ 0.32
LIMS2-217ENST00000545738 LCA5LO95447 670 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 LAMP2P13473 410 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-217ENST00000545738 RPL7AP62424 266 aaKnown RBP17.05■□□□□ 0.32
LIMS2-217ENST00000545738 ZNF268Q14587 947 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-217ENST00000545738 VPS36Q86VN1 386 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 CMTM8Q8IZV2 173 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 ACRBPQ8NEB7 543 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 ZSCAN18Q8TBC5 510 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-217ENST00000545738 ADAMTS19Q8TE59 1207 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 RPGRIP1Q96KN7 1286 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 ASB16Q96NS5 453 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 SLC2A13Q96QE2 648 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 RPP25Q9BUL9 199 aaKnown RBP17.05■□□□□ 0.32
LIMS2-217ENST00000545738 PHF7Q9BWX1 381 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-217ENST00000545738 KCNF1Q9H3M0 494 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 SLITRK6Q9H5Y7 841 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 SFMBT1Q9UHJ3 866 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 MYO10Q9HD67 2058 aa17.05■□□□□ 0.32
LIMS2-217ENST00000545738 RCCD1A6NED2 376 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 MSI1O43347 362 aaKnown RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 NDUFA10O95299 355 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 FGF19O95750 216 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 BMP1P13497 986 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 VIPR2P41587 438 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 PPP3CCP48454 512 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 TUBP50607 506 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 RNASE9P60153 205 aaKnown RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 YWHAZP63104 245 aaKnown RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 OGDHQ02218 1023 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 MAMLD1Q13495 774 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 HECTD3Q5T447 861 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 PLEKHA7Q6IQ23 1121 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 TMTC1Q8IUR5 882 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 ARID3BQ8IVW6 561 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 DEFB106AQ8N104 65 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 C3orf20Q8ND61 904 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 ADAM32Q8TC27 787 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 FGF14Q92915 247 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 USP13Q92995 863 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 ZNF653Q96CK0 615 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 GCNAQ96QF7 691 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 DESI2Q9BSY9 194 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 POPDC2Q9HBU9 364 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 CALB1P05937 261 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 NCAM1P13591 858 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 HDCP19113 662 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 RFC1P35251 1148 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 BTBD8Q5XKL5 378 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 PARM1Q6UWI2 310 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 TOGARAM2Q6ZUX3 1019 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 ZDHHC17Q8IUH5 632 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 VCPIP1Q96JH7 1222 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 ZNF830Q96NB3 372 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms