RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 USP49Q70CQ1 688 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 TRAPPC11Q7Z392 1133 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 RGL4Q8IZJ4 473 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 LRIG1Q96JA1 1093 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 B3GNT5Q9BYG0 378 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 ZNF518BQ9C0D4 1074 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 CHORDC1Q9UHD1 332 aaPredicted RBP15.63■□□□□ 0.09
RTN3-214ENST00000545432 SH3BP1Q9Y3L3 701 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 E9PAM4 449 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 TK2O00142 265 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 IGLV3-19P01714 112 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 TNNC2P02585 160 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 MAOBP27338 520 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 IL27RAQ6UWB1 636 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 WDR49Q8IV35 697 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 CHPFQ8IZ52 775 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 FBXO32Q969P5 355 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 CDC6Q99741 560 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 KLF16Q9BXK1 252 aaPredicted RBP15.62■□□□□ 0.09
RTN3-214ENST00000545432 FGFBP2Q9BYJ0 223 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 PCIF1Q9H4Z3 704 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 CCSER2Q9H7U1 834 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 IL21RQ9HBE5 538 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 WDR35Q9P2L0 1181 aa15.62■□□□□ 0.09
RTN3-214ENST00000545432 TRABD2BA6NFA1 517 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 ZNF233A6NK53 670 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 METTL12A8MUP2 240 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 NDUFS2O75306 463 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 GCNT3O95395 438 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 SMAD1Q15797 465 aaKnown RBP15.61■□□□□ 0.09
RTN3-214ENST00000545432 ANO4Q32M45 955 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 HS2ST1Q7LGA3 356 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 SCAMP5Q8TAC9 235 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 EPSTI1Q96J88 318 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 XPO6Q96QU8 1125 aaKnown RBP15.61■□□□□ 0.09
RTN3-214ENST00000545432 KCNK16Q96T55 309 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 MMS19Q96T76 1030 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 SLC6A17Q9H1V8 727 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 SNX25Q9H3E2 840 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 DPEP3Q9H4B8 488 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 TM7SF3Q9NS93 570 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 DNAJC17Q9NVM6 304 aaKnown RBP15.61■□□□□ 0.09
RTN3-214ENST00000545432 TBC1D7Q9P0N9 293 aa15.61■□□□□ 0.09
RTN3-214ENST00000545432 R3HCC1Q9Y3T6 440 aaKnown RBP15.61■□□□□ 0.09
RTN3-214ENST00000545432 CLDN5O00501 218 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 NPC1O15118 1278 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 FLRT2O43155 660 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 CILPO75339 1184 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 ATXN1LP0C7T5 689 aaKnown RBP15.6■□□□□ 0.09
RTN3-214ENST00000545432 TYRP14679 529 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 ACO1P21399 889 aaKnown RBP15.6■□□□□ 0.09
RTN3-214ENST00000545432 CYP4F3Q08477 520 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 SV2BQ7L1I2 683 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 CBWD2Q8IUF1 395 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 GALNT15Q8N3T1 639 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 B3GALNT2Q8NCR0 500 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 LSM14AQ8ND56 463 aaKnown RBP15.6■□□□□ 0.09
RTN3-214ENST00000545432 TOE1Q96GM8 510 aaKnown RBP15.6■□□□□ 0.09
RTN3-214ENST00000545432 UBL7Q96S82 380 aaPredicted RBP15.6■□□□□ 0.09
RTN3-214ENST00000545432 GAREM1Q9H706 876 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 VRTNQ9H8Y1 702 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 KIAA1586Q9HCI6 787 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 OSGEPQ9NPF4 335 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 FNDC3AQ9Y2H6 1198 aaKnown RBP15.6■□□□□ 0.09
RTN3-214ENST00000545432 SLC27A6Q9Y2P4 619 aa15.6■□□□□ 0.09
RTN3-214ENST00000545432 KCNJ18B7U540 433 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 WASH3PC4AMC7 463 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 CER1O95813 267 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 NCAM1P13591 858 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 OXTRP30559 389 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 MATKP42679 507 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 PGFP49763 221 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 SLC5A3P53794 718 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 SF3A1Q15459 793 aaKnown RBP15.59■□□□□ 0.09
RTN3-214ENST00000545432 PTPRNQ16849 979 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 HLA-BQ31612 363 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 FUT11Q495W5 492 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 SYCP3Q8IZU3 236 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 PDCD7Q8N8D1 485 aaKnown RBP15.59■□□□□ 0.09
RTN3-214ENST00000545432 ZMIZ2Q8NF64 920 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 OR6B3Q8NGW1 331 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 SCFD1Q8WVM8 642 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 P2RY11Q96G91 374 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 TRIM9Q9C026 710 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 MKRN2Q9H000 416 aaKnown RBP15.59■□□□□ 0.09
RTN3-214ENST00000545432 GZF1Q9H116 711 aaPredicted RBP15.59■□□□□ 0.09
RTN3-214ENST00000545432 XYLT2Q9H1B5 865 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 PCED1AQ9H1Q7 454 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 CSNK1G1Q9HCP0 422 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 CYLDQ9NQC7 956 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 THAP10Q9P2Z0 257 aaPredicted RBP15.59■□□□□ 0.09
RTN3-214ENST00000545432 RAD54BQ9Y620 910 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 STON1Q9Y6Q2 735 aa15.59■□□□□ 0.09
RTN3-214ENST00000545432 A8MXQ7 604 aa15.58■□□□□ 0.08
RTN3-214ENST00000545432 BCAT2O15382 392 aaPredicted RBP15.58■□□□□ 0.08
RTN3-214ENST00000545432 TLR5O60602 858 aa15.58■□□□□ 0.08
RTN3-214ENST00000545432 PRPF6O94906 941 aaKnown RBP15.58■□□□□ 0.08
RTN3-214ENST00000545432 HOXD13P35453 343 aa15.58■□□□□ 0.08
RTN3-214ENST00000545432 WDR72Q3MJ13 1102 aa15.58■□□□□ 0.08
RTN3-214ENST00000545432 Q6ZNB5 142 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms