RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PBLDP30039 288 aaPredicted RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 POU6F1Q14863 301 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 TIGD7Q6NT04 549 aaPredicted RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 SLC27A1Q6PCB7 646 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 NLRP9Q7RTR0 991 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 TMC7Q7Z402 723 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 COPS5Q92905 334 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 KAT5Q92993 513 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 CAPN10Q9HC96 672 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 RBM22Q9NW64 420 aaKnown RBP eCLIP13.21□□□□□ -0.297e-6■■■■□ 24.6
CHD4-211ENST00000544484 SMPD4Q9NXE4 827 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 HAO1Q9UJM8 370 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 MFSD10Q14728 455 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 CCDC60Q8IWA6 550 aaPredicted RBP13.21□□□□□ -0.3
CHD4-211ENST00000544484 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 FAM129AQ9BZQ8 928 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 CIPCQ9C0C6 399 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 ACP6Q9NPH0 428 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 TBKBP1A7MCY6 615 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 LZTS3O60299 673 aaPredicted RBP13.21□□□□□ -0.3
CHD4-211ENST00000544484 TRIM16O95361 564 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 MAPTP10636 758 aaKnown RBP13.21□□□□□ -0.3
CHD4-211ENST00000544484 COPAP53621 1224 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 RHOAP61586 193 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 DLG4P78352 724 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 TTLL9Q3SXZ7 439 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 C11orf74Q86VG3 221 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 B4GALNT2Q8NHY0 566 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 HDAC7Q8WUI4 952 aa13.21□□□□□ -0.3
CHD4-211ENST00000544484 UTP6Q9NYH9 597 aaKnown RBP13.21□□□□□ -0.3
CHD4-211ENST00000544484 ACKR2O00590 384 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 MT-CO1P00395 513 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 PTPRAP18433 802 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 ERMARDQ5T6L9 678 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 NT5DC1Q5TFE4 455 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 CERS5Q8N5B7 392 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 THUMPD3Q9BV44 507 aaKnown RBP13.2□□□□□ -0.3
CHD4-211ENST00000544484 ABHD16BQ9H3Z7 469 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 SLC25A13Q9UJS0 675 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 DSEQ9UL01 958 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 TFE3P19532 575 aaPredicted RBP13.2□□□□□ -0.3
CHD4-211ENST00000544484 AMPD1P23109 780 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 SERPINB8P50452 374 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 VGLL4Q14135 290 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 DCDC2Q9UHG0 476 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 TSPAN3O60637 253 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 CSHL1Q14406 222 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 DCCP43146 1447 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 O00370 1275 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 NKRFO15226 690 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHD4-211ENST00000544484 TIMM44O43615 452 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 VPS26AO75436 327 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 ERVK-9P63128 1117 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 MFSD7Q6UXD7 560 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 ECSITQ9BQ95 431 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 ANKZF1Q9H8Y5 726 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 HDAC4P56524 1084 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 ILDR2Q71H61 639 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 MTMR9Q96QG7 549 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 MTG1Q9BT17 334 aaPredicted RBP13.2□□□□□ -0.3
CHD4-211ENST00000544484 SLC40A1Q9NP59 571 aa13.2□□□□□ -0.3
CHD4-211ENST00000544484 TRPC5OSA6NMA1 111 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 EVPLLA8MZ36 301 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 KCNK1O00180 336 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 MYL4P12829 197 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
CHD4-211ENST00000544484 PTENP60484 403 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 DGKZQ13574 1117 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
CHD4-211ENST00000544484 UGT3A1Q6NUS8 523 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD4-211ENST00000544484 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 DNAJC16Q9Y2G8 782 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 STRNO43815 780 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 PLOD1Q02809 727 aaPredicted RBP13.19□□□□□ -0.3
CHD4-211ENST00000544484 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 FAM171A1Q5VUB5 890 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 BRSK2Q8IWQ3 736 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 GPC2Q8N158 579 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 CNDP1Q96KN2 507 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 ATXN3LQ9H3M9 355 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 C10orf88Q9H8K7 445 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 MROH2AA6NES4 1674 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 HOXA2O43364 376 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 EGFRP00533 1210 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 CCDC130P13994 396 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 BGNP21810 368 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 MPP3Q13368 585 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 CCNJLQ8IV13 435 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 APOA4P06727 396 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms