RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 BSPRYQ5W0U4 402 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 DDX42Q86XP3 938 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDX55-211ENST00000544429 PASD1Q8IV76 773 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 YAF2Q8IY57 180 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 SIX5Q8N196 739 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 CLEC4CQ8WTT0 213 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 OSCP1Q8WVF1 389 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 CPXM1Q96SM3 734 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 LRFN3Q9BTN0 628 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 EDEM3Q9BZQ6 932 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 HEBP1Q9NRV9 189 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 SMPD4Q9NXE4 827 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 TJP2Q9UDY2 1190 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 DNMT3LQ9UJW3 386 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 FBXL21Q9UKT6 434 aa20.06■□□□□ 0.8
DDX55-211ENST00000544429 E2F8A0AVK6 867 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 E5RJQ4 531 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 PIK3R2O00459 728 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 LSM8O95777 96 aaKnown RBP20.05■□□□□ 0.8
DDX55-211ENST00000544429 FYNP06241 537 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 RALAP11233 206 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 GLULP15104 373 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 CDR2Q01850 454 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 MLF2Q15773 248 aaPredicted RBP20.05■□□□□ 0.8
DDX55-211ENST00000544429 EML3Q32P44 896 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 CWF19L1Q69YN2 538 aaKnown RBP20.05■□□□□ 0.8
DDX55-211ENST00000544429 BEND5Q7L4P6 421 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 TADA2BQ86TJ2 420 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 SCUBE3Q8IX30 993 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 C1orf131Q8NDD1 294 aaKnown RBP20.05■□□□□ 0.8
DDX55-211ENST00000544429 SLC20A1Q8WUM9 679 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 WBP2Q969T9 261 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 ABCC13Q9NSE7 274 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 IFNKQ9P0W0 207 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 NUDT5Q9UKK9 219 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 CA14Q9ULX7 337 aa20.05■□□□□ 0.8
DDX55-211ENST00000544429 OTOL1A6NHN0 477 aaPredicted RBP20.04■□□□□ 0.8
DDX55-211ENST00000544429 MMEP08473 750 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 FMO1Q01740 532 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 TNK2Q07912 1038 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 PTPN20Q4JDL3 420 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 C10orf120Q5SQS8 335 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 MSANTD2Q6P1R3 559 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 IRF2BP2Q7Z5L9 587 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 ZNF687Q8N1G0 1237 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 OLIG1Q8TAK6 271 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 PBXIP1Q96AQ6 731 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 CHFRQ96EP1 664 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 PPP1R13BQ96KQ4 1090 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 SYT11Q9BT88 431 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 ST7Q9NRC1 585 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 GTSE1Q9NYZ3 720 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 CFAP97Q9P2B7 532 aa20.04■□□□□ 0.8
DDX55-211ENST00000544429 MYOFQ9NZM1 2061 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 MDM4O15151 490 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 SART1O43290 800 aaKnown RBP20.03■□□□□ 0.8
DDX55-211ENST00000544429 LTFP02788 710 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 CYP1A1P04798 512 aaPredicted RBP20.03■□□□□ 0.8
DDX55-211ENST00000544429 GABRB2P47870 512 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 NOMO3P69849 1222 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 TAF3Q5VWG9 929 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 TRIM68Q6AZZ1 485 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 HTR3DQ70Z44 454 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 CACNA2D4Q7Z3S7 1137 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 FBXL6Q8N531 539 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 TMEM35BQ8NCS4 154 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 RNF214Q8ND24 703 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 MSANTD3Q96H12 275 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 SHDQ96IW2 340 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 XPO4Q9C0E2 1151 aaKnown RBP20.03■□□□□ 0.8
DDX55-211ENST00000544429 MIS12Q9H081 205 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 LINC00597Q9H2U6 94 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 OLA1Q9NTK5 396 aaKnown RBP20.03■□□□□ 0.8
DDX55-211ENST00000544429 WNT6Q9Y6F9 365 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 MIA3Q5JRA6 1907 aa20.03■□□□□ 0.8
DDX55-211ENST00000544429 A0A1W2PQJ5 194 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 ERBB2P04626 1255 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 ARSAP15289 507 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 RUNX3Q13761 415 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 ITPRIPL2Q3MIP1 535 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 BTBD8Q5XKL5 378 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 CC2D1AQ6P1N0 951 aaPredicted RBP20.02■□□□□ 0.8
DDX55-211ENST00000544429 ADGRG2Q8IZP9 1017 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 PIWIL1Q96J94 861 aaKnown RBP20.02■□□□□ 0.8
DDX55-211ENST00000544429 NOX5Q96PH1 765 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 NACA2Q9H009 215 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 EBF3Q9H4W6 596 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 TBC1D17Q9HA65 648 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 DUS2Q9NX74 493 aaKnown RBP20.02■□□□□ 0.8
DDX55-211ENST00000544429 AIPL1Q9NZN9 384 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 CEP83Q9Y592 693 aa20.02■□□□□ 0.8
DDX55-211ENST00000544429 ITIH6Q6UXX5 1313 aa20.02■□□□□ 0.79
DDX55-211ENST00000544429 STC2O76061 302 aa20.01■□□□□ 0.79
DDX55-211ENST00000544429 GLI1P08151 1106 aa20.01■□□□□ 0.79
DDX55-211ENST00000544429 UNGP13051 313 aaPredicted RBP20.01■□□□□ 0.79
DDX55-211ENST00000544429 FERP16591 822 aa20.01■□□□□ 0.79
DDX55-211ENST00000544429 CLCN5P51795 746 aa20.01■□□□□ 0.79
DDX55-211ENST00000544429 GAB4Q2WGN9 574 aa20.01■□□□□ 0.79
DDX55-211ENST00000544429 E4F1Q66K89 784 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms