RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
PTPN6-220ENST00000543115 A0A1W2PQH9 124 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 TM4SF5O14894 197 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 ADRB1P08588 477 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 LIMK1P53667 647 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 CREB5Q02930 508 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 ANO4Q32M45 955 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 EDRF1Q3B7T1 1238 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 USP39Q53GS9 565 aaKnown RBP12.72□□□□□ -0.37
PTPN6-220ENST00000543115 PMS2CLQ68D20 193 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 KRT39Q6A163 491 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 HTR3DQ70Z44 454 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 SCD5Q86SK9 330 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 FMR1NBQ8N0W7 255 aaPredicted RBP12.72□□□□□ -0.37
PTPN6-220ENST00000543115 FRMD1Q8N878 549 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 OLIG1Q8TAK6 271 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 ARID3AQ99856 593 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 PNPLA8Q9NP80 782 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 VPS45Q9NRW7 570 aa12.72□□□□□ -0.37
PTPN6-220ENST00000543115 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.37
PTPN6-220ENST00000543115 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.71□□□□□ -0.37
PTPN6-220ENST00000543115 RHOBTB1O94844 696 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 CAVIN2O95810 425 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 RARGP13631 454 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 GTF2H1P32780 548 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 ATP5C1P36542 298 aaKnown RBP12.71□□□□□ -0.37
PTPN6-220ENST00000543115 PRCPP42785 496 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 TNFRSF4P43489 277 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 MXI1P50539 228 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 KIF11P52732 1056 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 PMS1P54277 932 aaKnown RBP12.71□□□□□ -0.37
PTPN6-220ENST00000543115 HSF5Q4G112 596 aaPredicted RBP12.71□□□□□ -0.37
PTPN6-220ENST00000543115 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 STPG1Q5TH74 334 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 BTBD8Q5XKL5 378 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 MIB1Q86YT6 1006 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 RLN3Q8WXF3 142 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 ERCC4Q92889 916 aaPredicted RBP12.71□□□□□ -0.37
PTPN6-220ENST00000543115 TATDN2Q93075 761 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 P2RY11Q96G91 374 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 DUSP16Q9BY84 665 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 CNTNAP3Q9BZ76 1288 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTPN6-220ENST00000543115 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 DEC1Q9P2X7 70 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 PCDHA5Q9Y5H7 936 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
PTPN6-220ENST00000543115 TBC1D3BA6NDS4 549 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 PATE3B3GLJ2 98 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 NEDD8-MDP1E9PL57 170 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 CETN3O15182 167 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
PTPN6-220ENST00000543115 KCNA4P22459 653 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 P2RY2P41231 377 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 RAD23BP54727 409 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 EOGTQ5NDL2 527 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 C10orf76Q5T2E6 689 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 IL31Q6EBC2 164 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 Q6ZNB5 142 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 TPGS1Q6ZTW0 290 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 TOGARAM2Q6ZUX3 1019 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 CCDC186Q7Z3E2 898 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 ZNF513Q8N8E2 541 aaPredicted RBP12.7□□□□□ -0.38
PTPN6-220ENST00000543115 CCDC150Q8NCX0 1101 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 FBXL13Q8NEE6 735 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 ENGASEQ8NFI3 743 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 HEXIM2Q96MH2 286 aaKnown RBP12.7□□□□□ -0.38
PTPN6-220ENST00000543115 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 DNAJC17Q9NVM6 304 aaKnown RBP12.7□□□□□ -0.38
PTPN6-220ENST00000543115 RALGAPA1Q6GYQ0 2036 aa12.7□□□□□ -0.38
PTPN6-220ENST00000543115 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 TCRBV21S2A2A0A5A6 115 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 TRIM49BA6NDI0 452 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 PRRT4C9JH25 899 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 CACNG3O60359 315 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 STC2O76061 302 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 ALDH1A2O94788 518 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 KLKB1P03952 638 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 EPB41P11171 864 aaKnown RBP12.69□□□□□ -0.38
PTPN6-220ENST00000543115 TYRP14679 529 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 WASP42768 502 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 ZNF658Q5TYW1 1059 aaPredicted RBP12.69□□□□□ -0.38
PTPN6-220ENST00000543115 EGFLAMQ63HQ2 1017 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 ANKRD40Q6AI12 368 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 KLHDC10Q6PID8 442 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 ZC3H3Q8IXZ2 948 aaKnown RBP12.69□□□□□ -0.38
PTPN6-220ENST00000543115 HMGB4Q8WW32 186 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 BHMTQ93088 406 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 ACOX2Q99424 681 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 BBS2Q9BXC9 721 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms