RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 FBXO32Q969P5 355 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 PIWIL1Q96J94 861 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF830Q96NB3 372 aaPredicted RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 NECTIN4Q96NY8 510 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 NPY6RQ99463 290 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 CORO1BQ9BR76 489 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 C11orf70Q9BRQ4 267 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SLC46A2Q9BY10 475 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 PACSIN1Q9BY11 444 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 RNF38Q9H0F5 515 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 THAP2Q9H0W7 228 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 POPDC2Q9HBU9 364 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 LUC7LQ9NQ29 371 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 ASAH2Q9NR71 780 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SEPT11Q9NVA2 429 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 RRN3Q9NYV6 651 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 TRPM5Q9NZQ8 1165 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 UVRAGQ9P2Y5 699 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 CNOT8Q9UFF9 292 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 ZFP37Q9Y6Q3 630 aaPredicted RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 OBSL1O75147 1896 aa6.15□□□□□ -1.43
ABCF1-207ENST00000542772 EYSQ5T1H1 3165 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 A0A1W2PQH9 124 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 A0A1W2PRU2 124 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 GRXCR2A6NFK2 248 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 MBTPS2O43462 519 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 NRDCO43847 1150 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 HSF2BPO75031 334 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ABL1P00519 1130 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 F9P00740 461 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RALAP11233 206 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RARGP13631 454 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 HDCP19113 662 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ATP5C1P36542 298 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 FLT3P36888 993 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ARHGAP25P42331 645 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 PTPN9P43378 593 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ZNF143P52747 638 aaPredicted RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RPL7AP62424 266 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 NTHL1P78549 312 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SLC7A9P82251 487 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ZXDBP98169 803 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RING1Q06587 406 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 CCDC85BQ15834 202 aaPredicted RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SLC5A9Q2M3M2 681 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 PUS10Q3MIT2 529 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SLC25A52Q3SY17 297 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 LEXMQ3ZCV2 418 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 CCDC14Q49A88 953 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RARS2Q5T160 578 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 HECTD3Q5T447 861 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 BTBD8Q5XKL5 378 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 TRNP1Q6NT89 227 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 TOGARAM2Q6ZUX3 1019 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 PDZD4Q76G19 769 aaPredicted RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 STRADAQ7RTN6 431 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 REXO1L1PQ8IX06 675 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RHOT2Q8IXI1 618 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 TXLNBQ8N3L3 684 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RNF10Q8N5U6 811 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ACRBPQ8NEB7 543 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 JOSD2Q8TAC2 188 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SHKBP1Q8TBC3 707 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RXFP2Q8WXD0 754 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 CTNNBL1Q8WYA6 563 aaPredicted RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 MRPS31Q92665 395 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 AZIN2Q96A70 460 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ARHGEF26Q96DR7 871 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 TCEAL4Q96EI5 215 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SLC39A13Q96H72 371 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 RIPOR3Q96MK2 946 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 CYP2S1Q96SQ9 504 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 CDK5RAP1Q96SZ6 601 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 TRIM62Q9BVG3 475 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SELENOOQ9BVL4 669 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 KLF16Q9BXK1 252 aaPredicted RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 LACRTQ9GZZ8 138 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 ATXN3LQ9H3M9 355 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 TASP1Q9H6P5 420 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SYNCQ9H7C4 482 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 UBE2ZQ9H832 354 aaPredicted RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 PIDD1Q9HB75 910 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 TRPV4Q9HBA0 871 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 OLA1Q9NTK5 396 aaKnown RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 GDE1Q9NZC3 331 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 GMIPQ9P107 970 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 LCMT1Q9UIC8 334 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 CD207Q9UJ71 328 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SALL4Q9UJQ4 1053 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 MAGED2Q9UNF1 606 aaPredicted RBP6.14□□□□□ -1.43
ABCF1-207ENST00000542772 NAALADL1Q9UQQ1 740 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 USTQ9Y2C2 406 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 SCINQ9Y6U3 715 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 DUSP10Q9Y6W6 482 aa6.14□□□□□ -1.43
ABCF1-207ENST00000542772 C2orf78A6NCI8 922 aa6.13□□□□□ -1.43
ABCF1-207ENST00000542772 DPYSL4O14531 572 aa6.13□□□□□ -1.43
ABCF1-207ENST00000542772 COCHO43405 550 aa6.13□□□□□ -1.43
ABCF1-207ENST00000542772 GREM1O60565 184 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms