RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CCDC134Q9H6E4 229 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SUN2Q9UH99 717 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 BAG5Q9UL15 447 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC12A4Q9UP95 1085 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 GNGT2O14610 69 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 MICAL2O94851 1124 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC4A1P02730 911 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 MCF2P10911 925 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ADSSP30520 456 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 OAZ1P54368 228 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 BST1Q10588 318 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 GRM1Q13255 1194 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ACVR2BQ13705 512 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 FASTKD3Q14CZ7 662 aaKnown RBP8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 N4BP2L1Q5TBK1 243 aaPredicted RBP8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 LRRC8EQ6NSJ5 796 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 MON1BQ7L1V2 547 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 MYLK4Q86YV6 388 aaPredicted RBP8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SCUBE3Q8IX30 993 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 DEFB107AQ8IZN7 70 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 STKLD1Q8NE28 680 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SEC14L1Q92503 715 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 NKD2Q969F2 451 aaPredicted RBP8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 TRIM15Q9C019 465 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 LRRC40Q9H9A6 602 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 PLEKHA5Q9HAU0 1116 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 FBXO6Q9NRD1 293 aaPredicted RBP8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 GGA3Q9NZ52 723 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 PIN4Q9Y237 131 aaKnown RBP8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 DTNAQ9Y4J8 743 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 MROH7Q68CQ1 1323 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ARHGEF37A1IGU5 675 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 M0QYT0 321 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 PMM2O15305 246 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ZBTB7AO95365 584 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 UNGP13051 313 aaPredicted RBP8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ATP6V1B1P15313 513 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 TSHRP16473 764 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ATP6V1C1P21283 382 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 MGAT5Q09328 741 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 TMEM62Q0P6H9 643 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ITGA9Q13797 1035 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 AMHR2Q16671 573 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 UNC45BQ8IWX7 931 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 COLGALT1Q8NBJ5 622 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC7A14Q8TBB6 771 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ASB7Q9H672 318 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 ARHGEF3Q9NR81 526 aa8.48□□□□□ -1.05
PRKAB1-207ENST00000542698 A0A087WZ62 844 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 TCRBV9S1A1TA0A576 114 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 E9PBE3 544 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 DFFAO00273 331 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 KLHL41O60662 606 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 C4BPAP04003 597 aaKnown RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SERPINE1P05121 402 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SERPINB5P36952 375 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC1A6P48664 564 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC26A2P50443 739 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 GLRA4Q5JXX5 417 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 KCNT2Q6UVM3 1135 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 ANKS1BQ7Z6G8 1248 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 USP33Q8TEY7 942 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 BSNDQ8WZ55 320 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 JADE3Q92613 823 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SLCO2A1Q92959 643 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 PPP2R3CQ969Q6 453 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 NRBF2Q96F24 287 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 BORCS6Q96GS4 357 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 FAM193BQ96PV7 902 aaPredicted RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 FDXACB1Q9BRP7 624 aaPredicted RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 NTPCRQ9BSD7 190 aaKnown RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 NDUFA13Q9P0J0 144 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 COL20A1Q9P218 1284 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SLC17A7Q9P2U7 560 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 CDYLQ9Y232 598 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 EFR3BQ9Y2G0 817 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 E5RJQ4 531 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 CHADO15335 359 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 KRT36O76013 467 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 APOA4P06727 396 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 RARBP10826 455 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 ECHS1P30084 290 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 PHEXP78562 749 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 CDC42EP1Q00587 391 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 LY6KQ17RY6 165 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 C15orf59Q2T9L4 293 aaPredicted RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 NAPEPLDQ6IQ20 393 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 NPNTQ6UXI9 565 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 KYAT3Q6YP21 454 aaKnown RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 STRA8Q7Z7C7 330 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 PIWIL2Q8TC59 973 aaKnown RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 EFCAB1Q9HAE3 211 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 EML4Q9HC35 981 aaKnown RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 MRGBPQ9NV56 204 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 CORO1CQ9ULV4 474 aaPredicted RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 AURKCQ9UQB9 309 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 ZMYM2Q9UBW7 1377 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 PSMD3O43242 534 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 TIMM44O43615 452 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms