RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 WNT5BQ9H1J7 359 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 SLC6A17Q9H1V8 727 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 TP63Q9H3D4 680 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 CUEDC2Q9H467 287 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 MROH8Q9H579 483 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 SLITRK6Q9H5Y7 841 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 TUT1Q9H6E5 874 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 AZI2Q9H6S1 392 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 ELAC1Q9H777 363 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 MMRN2Q9H8L6 949 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 WDR6Q9NNW5 1121 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 HMG20AQ9NP66 347 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 PRDM9Q9NQV7 894 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 FBXO28Q9NVF7 368 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 INTS7Q9NVH2 962 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 INTS13Q9NVM9 706 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 THG1LQ9NWX6 298 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 SNTG2Q9NY99 539 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 NKIRAS1Q9NYS0 192 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 NYAP2Q9P242 653 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 CNOT8Q9UFF9 292 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 DBNLQ9UJU6 430 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 PTBP2Q9UKA9 531 aaKnown RBP5.37□□□□□ -1.55
SNHG1-218ENST00000541615 PCDHA7Q9UN72 937 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 ACTL7BQ9Y614 415 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 ZHX2Q9Y6X8 837 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 ARHGEF10O15013 1369 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 TRAPPC8Q9Y2L5 1435 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 PZPP20742 1482 aa5.37□□□□□ -1.55
SNHG1-218ENST00000541615 CYP3A7-CYP3A51PA0A087WV96 503 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 C15orf38-AP3S2A0A0A6YYH1 394 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 A0A0U1RQJ8 604 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 LOC100653049A0A140TA62 436 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ARHGEF37A1IGU5 675 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ARGFXA6NJG6 315 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SLC9B1P1A6NJY1 282 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 DBX1A6NMT0 343 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 MEI4A8MW99 385 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PSMD11O00231 422 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CCRL2O00421 344 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 FOXP2O15409 715 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 AKAP10O43572 662 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 DYRK3O43781 588 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SNAP91O60641 907 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TOM1O60784 492 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 DEAF1O75398 565 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 KRT34O76011 436 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 USP1O94782 785 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CDK14O94921 469 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 RASGRP1O95267 797 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 STAU1O95793 577 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 KRT1P04264 644 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 S100A9P06702 114 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CD48P09326 243 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 FAM58BPP0C7Q3 252 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 GM2AP17900 193 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 IMPDH1P20839 514 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CYP3A7P24462 503 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CCNE1P24864 410 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 NAMPTP43490 491 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 RECQLP46063 649 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 MTIF2P46199 727 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 NPTX2P47972 431 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ARSDP51689 593 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 NDUFA8P51970 172 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SLC18A1P54219 525 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PEX3P56589 373 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PSMC5P62195 406 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ACY1Q03154 408 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 NR1H3Q13133 447 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 APOFQ13790 326 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 FRG1Q14331 258 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SLC14A2Q15849 920 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TAF12Q16514 161 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 MAPK6Q16659 721 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PFKFB3Q16875 520 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 AASDHQ4L235 1098 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 HES5Q5TA89 166 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CDKAL1Q5VV42 579 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 FAM91A1Q658Y4 838 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SWSAP1Q6NVH7 229 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ELMSAN1Q6PJG2 1045 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 BLOC1S2Q6QNY1 142 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 RNF19BQ6ZMZ0 732 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 KRT74Q7RTS7 529 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TAS1R3Q7RTX0 852 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 RIC3Q7Z5B4 369 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 GPR142Q7Z601 462 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ARPINQ7Z6K5 226 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 GLRX5Q86SX6 157 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SETD3Q86TU7 594 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 LRRC6Q86X45 466 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 MIB1Q86YT6 1006 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 P3H2Q8IVL5 708 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SYTL1Q8IYJ3 562 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 RCOR2Q8IZ40 523 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 DPP10Q8N608 796 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SLC17A8Q8NDX2 589 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms