RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 NUDT18Q6ZVK8 323 aa25.36■■□□□ 1.65
LEMD3-203ENST00000541171 TMC2Q8TDI7 906 aa25.36■■□□□ 1.65
LEMD3-203ENST00000541171 ERLEC1Q96DZ1 483 aa25.36■■□□□ 1.65
LEMD3-203ENST00000541171 A0A1B0GVL5 298 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 PDXKO00764 312 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 HLA-DRAP01903 254 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 ASPAP45381 313 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 ZNF252P-AS1Q0IIN9 211 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 BYSLQ13895 437 aaKnown RBP25.35■■□□□ 1.65
LEMD3-203ENST00000541171 GPRIN1Q7Z2K8 1008 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 TRMT11Q7Z4G4 463 aaKnown RBP25.35■■□□□ 1.65
LEMD3-203ENST00000541171 UNC93AQ86WB7 457 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 TERB1Q8NA31 727 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 TAF4BQ92750 862 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 KLF16Q9BXK1 252 aaPredicted RBP25.35■■□□□ 1.65
LEMD3-203ENST00000541171 CSNK1G1Q9HCP0 422 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 TMEM74BQ9NUR3 256 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 FRMD4BQ9Y2L6 1034 aa25.35■■□□□ 1.65
LEMD3-203ENST00000541171 ATXN2Q99700 1313 aaKnown RBP25.35■■□□□ 1.65
LEMD3-203ENST00000541171 NEDD8-MDP1E9PL57 170 aa25.34■■□□□ 1.65
LEMD3-203ENST00000541171 ASS1P00966 412 aaKnown RBP25.34■■□□□ 1.65
LEMD3-203ENST00000541171 FAM200BP0CF97 657 aa25.34■■□□□ 1.65
LEMD3-203ENST00000541171 FOXC1Q12948 553 aa25.34■■□□□ 1.65
LEMD3-203ENST00000541171 GRAMD4Q6IC98 578 aa25.34■■□□□ 1.65
LEMD3-203ENST00000541171 TPGS1Q6ZTW0 290 aa25.34■■□□□ 1.65
LEMD3-203ENST00000541171 DEFB119Q8N690 84 aa25.34■■□□□ 1.65
LEMD3-203ENST00000541171 DNAJC17Q9NVM6 304 aaKnown RBP25.34■■□□□ 1.65
LEMD3-203ENST00000541171 MYO18AQ92614 2054 aaKnown RBP25.33■■□□□ 1.65
LEMD3-203ENST00000541171 CYP26A1O43174 497 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 CALUO43852 315 aaPredicted RBP25.33■■□□□ 1.65
LEMD3-203ENST00000541171 HOXB2P14652 356 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 PFKFB1P16118 471 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 ATP5C1P36542 298 aaKnown RBP25.33■■□□□ 1.65
LEMD3-203ENST00000541171 MAPK8P45983 427 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 C1orf220Q5T0J3 134 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 LYSMD4Q5XG99 296 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 HTR3DQ70Z44 454 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 MIB1Q86YT6 1006 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 SYT12Q8IV01 421 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 KCNV2Q8TDN2 545 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 TWNKQ96RR1 684 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 DUSP9Q99956 384 aaKnown RBP25.33■■□□□ 1.65
LEMD3-203ENST00000541171 BBS2Q9BXC9 721 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 NUSAP1Q9BXS6 441 aaKnown RBP25.33■■□□□ 1.65
LEMD3-203ENST00000541171 OSER1Q9NX31 292 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 EVLQ9UI08 416 aaPredicted RBP25.33■■□□□ 1.65
LEMD3-203ENST00000541171 LSM7Q9UK45 103 aaKnown RBP25.33■■□□□ 1.65
LEMD3-203ENST00000541171 NUDT5Q9UKK9 219 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 HCN2Q9UL51 889 aa25.33■■□□□ 1.65
LEMD3-203ENST00000541171 USP24Q9UPU5 2620 aa25.33■■□□□ 1.64
LEMD3-203ENST00000541171 IKBKBO14920 756 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 MDM4O15151 490 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 GABRG2P18507 467 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 TRIM21P19474 475 aaKnown RBP25.32■■□□□ 1.64
LEMD3-203ENST00000541171 ACO1P21399 889 aaKnown RBP25.32■■□□□ 1.64
LEMD3-203ENST00000541171 NTSR1P30989 418 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 VAMP7P51809 220 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 LMAN2Q12907 356 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 EGFLAMQ63HQ2 1017 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 CLEC20AQ6ZU45 233 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 TMEM174Q8WUU8 243 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 CYFIP2Q96F07 1278 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 XPO6Q96QU8 1125 aaKnown RBP25.32■■□□□ 1.64
LEMD3-203ENST00000541171 MMRN2Q9H8L6 949 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 SCML2Q9UQR0 700 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 GON4LQ3T8J9 2241 aa25.32■■□□□ 1.64
LEMD3-203ENST00000541171 MYH10P35580 1976 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 GREM1O60565 184 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 TRIM49P0CI25 452 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 TRIM49CP0CI26 452 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 TYRP14679 529 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 ITPKAP23677 461 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 GOLGA8FQ08AF8 430 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 GOLGA8DPQ0D2H9 430 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 DEFB124Q8NES8 71 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 ACOX2Q99424 681 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 HNRNPABQ99729 332 aaKnown RBP25.31■■□□□ 1.64
LEMD3-203ENST00000541171 IMPG2Q9BZV3 1241 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 NMUR1Q9HB89 426 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 CYLDQ9NQC7 956 aa25.31■■□□□ 1.64
LEMD3-203ENST00000541171 A0A1W2PQH9 124 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 HHLA1C9JL84 531 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 ZBTB24O43167 697 aaPredicted RBP25.3■■□□□ 1.64
LEMD3-203ENST00000541171 KIF20AO95235 890 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 CFIP05156 583 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 RARGP13631 454 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 CEACAM1P13688 526 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 CD58P19256 250 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 SPINK2P20155 84 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 CSRP1P21291 193 aaKnown RBP25.3■■□□□ 1.64
LEMD3-203ENST00000541171 CMA1P23946 247 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 GCLMP48507 274 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 RPL6Q02878 288 aaKnown RBP25.3■■□□□ 1.64
LEMD3-203ENST00000541171 SDE2Q6IQ49 451 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 CHPFQ8IZ52 775 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 BHMTQ93088 406 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 NT5C1AQ9BXI3 368 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 APOBEC3GQ9HC16 384 aaKnown RBP25.3■■□□□ 1.64
LEMD3-203ENST00000541171 FSCN3Q9NQT6 498 aa25.3■■□□□ 1.64
LEMD3-203ENST00000541171 CALCOCO1Q9P1Z2 691 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms