RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ZNHIT6Q9NWK9 470 aaKnown RBP19.68■□□□□ 0.74
VPS33A-205ENST00000541169 WDR35Q9P2L0 1181 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 TBC1D14Q9P2M4 693 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 HELZP42694 1942 aaKnown RBP19.68■□□□□ 0.74
VPS33A-205ENST00000541169 NCOR1O75376 2440 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 C5orf42Q9H799 3197 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 E2F8A0AVK6 867 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 ZNF263O14978 683 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 SERPING1P05155 500 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 ASGR2P07307 311 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 CFHP08603 1231 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 TNFAIP3P21580 790 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 HNRNPH3P31942 346 aaKnown RBP19.67■□□□□ 0.74
VPS33A-205ENST00000541169 MLLT6P55198 1093 aaPredicted RBP19.67■□□□□ 0.74
VPS33A-205ENST00000541169 YWHAZP63104 245 aaKnown RBP19.67■□□□□ 0.74
VPS33A-205ENST00000541169 CENPCQ03188 943 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 ARID5BQ14865 1188 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 VITQ6UXI7 678 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 OTUB2Q96DC9 234 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 CYP2S1Q96SQ9 504 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 KXD1Q9BQD3 176 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 COL25A1Q9BXS0 654 aaPredicted RBP19.67■□□□□ 0.74
VPS33A-205ENST00000541169 RNF38Q9H0F5 515 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 CCSER2Q9H7U1 834 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 NMUR1Q9HB89 426 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 POPDC2Q9HBU9 364 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 WNT16Q9UBV4 365 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 CYTH4Q9UIA0 394 aa19.67■□□□□ 0.74
VPS33A-205ENST00000541169 SPTBN5Q9NRC6 3674 aaKnown RBP19.66■□□□□ 0.74
VPS33A-205ENST00000541169 YJEFN3A6XGL0 299 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 E7ENQ6 273 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 PAPSS1O43252 624 aaPredicted RBP19.66■□□□□ 0.74
VPS33A-205ENST00000541169 HSF2BPO75031 334 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 PRAMEF12O95522 483 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 CALB1P05937 261 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 GZMAP12544 262 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 UNGP13051 313 aaPredicted RBP19.66■□□□□ 0.74
VPS33A-205ENST00000541169 GLULP15104 373 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 CHRNB2P17787 502 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 CASP14P31944 242 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 VIPR2P41587 438 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 USP4Q13107 963 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 PDGFRLQ15198 375 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 NAA35Q5VZE5 725 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 C1orf228Q6PIY5 440 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 POTEHQ6S545 545 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 ARCQ7LC44 396 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 BHLHA9Q7RTU4 235 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 SLC20A1Q8WUM9 679 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 CPLX3Q8WVH0 158 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 EDAQ92838 391 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 MSANTD3Q96H12 275 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 VCPIP1Q96JH7 1222 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 SLC22A12Q96S37 553 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 DNAJC7Q99615 494 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 OSER1Q9NX31 292 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 RRN3Q9NYV6 651 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 MUTYHQ9UIF7 546 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 ZNF510Q9Y2H8 683 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 CPQQ9Y646 472 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 MYO10Q9HD67 2058 aa19.66■□□□□ 0.74
VPS33A-205ENST00000541169 PI4K2BG5E9Z4 385 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 CAPN9O14815 690 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 GABBR2O75899 941 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 MMP8P22894 467 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 ZXDAP98168 799 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 SLC6A3Q01959 620 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 MTA1Q13330 715 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 NNTQ13423 1086 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 ZNF77Q15935 545 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 CLEC16AQ2KHT3 1053 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 PTPN20Q4JDL3 420 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 MSANTD2Q6P1R3 559 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 SLC26A9Q7LBE3 791 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 PHF13Q86YI8 300 aaPredicted RBP19.65■□□□□ 0.74
VPS33A-205ENST00000541169 SH3RF2Q8TEC5 729 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 RSAD2Q8WXG1 361 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 FAM149B1Q96BN6 582 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 DCLK3Q9C098 648 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 HAUS4Q9H6D7 363 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 BRD9Q9H8M2 597 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 SEPT11Q9NVA2 429 aaKnown RBP19.65■□□□□ 0.74
VPS33A-205ENST00000541169 MARCH2Q9P0N8 246 aa19.65■□□□□ 0.74
VPS33A-205ENST00000541169 LSM7Q9UK45 103 aaKnown RBP19.65■□□□□ 0.74
VPS33A-205ENST00000541169 HBS1LQ9Y450 684 aaKnown RBP19.65■□□□□ 0.74
VPS33A-205ENST00000541169 LEFTY2O00292 366 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 NCAM1P13591 858 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 ZNF75DP51815 510 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 GSCP56915 257 aaPredicted RBP19.64■□□□□ 0.73
VPS33A-205ENST00000541169 AMPD2Q01433 879 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 C1QBPQ07021 282 aaKnown RBP19.64■□□□□ 0.73
VPS33A-205ENST00000541169 SIGLEC14Q08ET2 396 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 MTF1Q14872 753 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 OR6B2Q6IFH4 312 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 CPA5Q8WXQ8 436 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 SHDQ96IW2 340 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 SYT11Q9BT88 431 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 KLF16Q9BXK1 252 aaPredicted RBP19.64■□□□□ 0.73
VPS33A-205ENST00000541169 SH3BP1Q9Y3L3 701 aa19.64■□□□□ 0.73
VPS33A-205ENST00000541169 GDI1P31150 447 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms