RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 IGHV1OR15-9A0A0B4J2B8 117 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 SPAARA0A1B0GVQ0 90 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 A0A1W2PQD8 194 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 NEDD8-MDP1E9PL57 170 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 CUTAO60888 179 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 ZDHHC11BP0C7U3 371 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 SLC14A1Q13336 389 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 NCOA4Q13772 614 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 E2F4Q16254 413 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 KNOP1Q1ED39 458 aaKnown RBP13.2□□□□□ -0.3
COPS7A-211ENST00000540408 ZNF423Q2M1K9 1284 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 C12orf56Q8IXR9 622 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 IPO4Q8TEX9 1081 aaKnown RBP13.2□□□□□ -0.3
COPS7A-211ENST00000540408 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
COPS7A-211ENST00000540408 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 CAPN10Q9HC96 672 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 TFIP11Q9UBB9 837 aaKnown RBP13.2□□□□□ -0.3
COPS7A-211ENST00000540408 KLK13Q9UKR3 277 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 CYP8B1Q9UNU6 501 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
COPS7A-211ENST00000540408 PVALEFA0A1B0GWK0 134 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 STX6O43752 255 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 CACNG3O60359 315 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 TYRP14679 529 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 MAP3K7CLP57077 242 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 BMT2Q1RMZ1 405 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 SGSM1Q2NKQ1 1148 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 EGFLAMQ63HQ2 1017 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 SCARA5Q6ZMJ2 495 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 TPGS1Q6ZTW0 290 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 HSPA12BQ96MM6 686 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 DNAI2Q9GZS0 605 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 SLC39A2Q9NP94 309 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 FSCN3Q9NQT6 498 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 MYOFQ9NZM1 2061 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 CHD6Q8TD26 2715 aa13.19□□□□□ -0.3
COPS7A-211ENST00000540408 A0A1W2PQF6 199 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 GFRA2O00451 464 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 POLR2DO15514 142 aaKnown RBP13.18□□□□□ -0.3
COPS7A-211ENST00000540408 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
COPS7A-211ENST00000540408 RPN1P04843 607 aaKnown RBP13.18□□□□□ -0.3
COPS7A-211ENST00000540408 FAM200BP0CF97 657 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 NDUFV2P19404 249 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 DGKGP49619 791 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 CASP4P49662 377 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 STARD3Q14849 445 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 E2F5Q15329 346 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 PLEKHG6Q3KR16 790 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 TADA2BQ86TJ2 420 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 UNC93AQ86WB7 457 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 CRYBG2Q8N1P7 616 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 SPRYD3Q8NCJ5 442 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 SLC2A14Q8TDB8 520 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 PARD3BQ8TEW8 1205 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 TAF4BQ92750 862 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 ZNF419Q96HQ0 510 aaPredicted RBP13.18□□□□□ -0.3
COPS7A-211ENST00000540408 GABRG3Q99928 467 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
COPS7A-211ENST00000540408 DNAAF2Q9NVR5 837 aaKnown RBP13.18□□□□□ -0.3
COPS7A-211ENST00000540408 MARK1Q9P0L2 795 aa13.18□□□□□ -0.3
COPS7A-211ENST00000540408 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
COPS7A-211ENST00000540408 FAM221BA6H8Z2 402 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 LRRIQ3A6PVS8 624 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-211ENST00000540408 TRIM24O15164 1050 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 YEATS4O95619 227 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 TBX18O95935 607 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 CCDC130P13994 396 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 ZNF132P52740 706 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 NDST1P52848 882 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 CLDN10P78369 228 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 EHHADHQ08426 723 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 COL9A2Q14055 689 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-211ENST00000540408 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
COPS7A-211ENST00000540408 LRSAM1Q6UWE0 723 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 KIAA1324Q6UXG2 1013 aaKnown RBP13.17□□□□□ -0.3
COPS7A-211ENST00000540408 MIB1Q86YT6 1006 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 SLC41A1Q8IVJ1 513 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 CHCHD4Q8N4Q1 142 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 WBP2Q969T9 261 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 MRGPRX1Q96LB2 322 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 ACOX2Q99424 681 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 SMOQ99835 787 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 IMPG2Q9BZV3 1241 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 ZDHHC5Q9C0B5 715 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-211ENST00000540408 BLZF1Q9H2G9 400 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 CSNK1G1Q9HCP0 422 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 FAM13BQ9NYF5 915 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms